| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0074 |
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| Symbol | |
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| ID | 7272243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 77378 |
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| End bp | 79183 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643568731 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_002465191 |
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| Protein GI | 219850759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.959881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGG AGGAAGAGAA GAAGCGGGCG TTCTCGCTCT ATCAGGAGGG AGCGTTCCAG
GCGTCGCTCG ACCTCTGCAC GGTCCTGGCC CGGGACGAAA AGGACCAGTC GCTCGATGTG
CTGGCGGCCA CCAACCTCTT CTCCCTCGGC GCGCTCGAGG AGGCGGAGGC CCGGTTTCGG
GATCTCGCGC TCCTGACCCC CGACTCCTCG TACGTCCACT CGTACCTCGG CAAGGTGCTG
GCTGCGGCTG GCAATGAGGA GGCGACCGCC GAGTACATCG AGGCTGTCAG GCTGGACCCT
GAGAATCAGG AGGGACTTCG GGCCTACGGT GCCTACCTGG CCGGGAAGAA CGATACGGCG
GGGGCCGTCC CGGTTCTCTC CCAACTGGTC CGCCTCTCCG GCCGTGAGGA GGACGTGAAG
ACGCTCGCCT CGATGCTGCT CGAGCAGGGG AACGGGGCGG TGGCACTGGA CCTGTATGCC
CGGTACCCTC CGGCAGGGGA CTGGTATATG TATATCGAGG CGCTGATGGC TACCGATGAC
CAGGTTGAGG CTCTCCGGGT CGCCGAGCAG GCGTACCGCA AGACTGGAGA ACAGCGGTAC
CTGCATCAGT ACCTCTCGGC CCTCGCGGTG GTCGATCAGT CAAGGGCACT GACCGAATAT
GCGGTCTACG CCGATGAGGA GGCTGACCCT GCGATCCGGT TCGACTATCT CCTCCTCCTC
CGGTCCAAAG GGGATCTGGA AGGGGCTTTG TCGGTGGCGA CAGCCCTGGT CGCTTCGGCG
GGAGCGCCGG TCTATCATCT GGTCAGGGCG GAGCTGCTGG CCGCCCTCGA CCGGAAGGAC
GAGGCAGAGG CCGCGTTCGT TGCGGTGATC AAACAGGAAC TCTCGTCGAT GGAGGATCCC
GAGACCCTGG ACCTGCTGAT CCGGCGGTAC CGGGAGTTCC TGATGGTAAG GTATGATCAG
CAGACAGTGC TGGTCCGGTT TCGGGCCGTG ATCGGGGACG GAGCGGATGT GGTCTCTCTG
CTGGCCATGG CGGCCCTGTA CACCTCGCTC GACGATCCGG TCGAGGCACG TTCCTGGTAT
TACCGGGCCT ACCGTGCTGA CTTCCTGAAT GGTGGGCTGC TCTATGCAGA GTTTCTGATC
GGCACCGGAG ATCAGCGCGA GTGTGAGAAG GTGGTGCTCT ACCTGCTCGG CACCCTCACC
CGGGTTGCCG ACCTGGAACG GGTGGCCGCG GTGGTCCTCG ATCAGCGGTA CGGCATGTAC
CGCCTCCCGC GGCTGCTTGA AAAACTGATC GCCTGCTGCG AGGCCTCCCT GCACCTGCTC
AGTTCGGCCG GCAGGGAACT CTGTGCGGTC GCGTTCCTGG TCTCGGCCAC CGATGCGTTC
GAAGCGGGGC AGTACCCCCG GTGCAAGGAG TGCTGCCTCC GGGGTCTCGA CCTGATGCCG
GGCCACCCCC GTTCCCTGCA GCCCGGGGAC TTCTTTGCCC TGCTGGTCCG GTGCAAGGAG
GAGTCGCTTG CTGATACCCC GGTGCTCGGG GAGCAGCGTG CACCTGAGGT GCAGGTGGTC
GACCAGGCCG GCCCGGAGGA GTCCGGCCCA GACCTCGATC TCGATCCGGT CGAGGAGCAG
GTGGTTGCGT TCCTCCGCAC CCATACCCGT GCCGAGGAGC AGGACCTCAG GACGTTGCTT
GGAACCCGGC GGGTCTCGGG GATCGTGAAC AGGCTGATCC GGAAGGCCGC CGCCGCCGGG
GTGGAGATCA TTGCAAAACA GGGTGTTGGG GAGAATGGTG AGATCTATGA GTACGTGGGA
CGATGA
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| Protein sequence | MKREEEKKRA FSLYQEGAFQ ASLDLCTVLA RDEKDQSLDV LAATNLFSLG ALEEAEARFR
DLALLTPDSS YVHSYLGKVL AAAGNEEATA EYIEAVRLDP ENQEGLRAYG AYLAGKNDTA
GAVPVLSQLV RLSGREEDVK TLASMLLEQG NGAVALDLYA RYPPAGDWYM YIEALMATDD
QVEALRVAEQ AYRKTGEQRY LHQYLSALAV VDQSRALTEY AVYADEEADP AIRFDYLLLL
RSKGDLEGAL SVATALVASA GAPVYHLVRA ELLAALDRKD EAEAAFVAVI KQELSSMEDP
ETLDLLIRRY REFLMVRYDQ QTVLVRFRAV IGDGADVVSL LAMAALYTSL DDPVEARSWY
YRAYRADFLN GGLLYAEFLI GTGDQRECEK VVLYLLGTLT RVADLERVAA VVLDQRYGMY
RLPRLLEKLI ACCEASLHLL SSAGRELCAV AFLVSATDAF EAGQYPRCKE CCLRGLDLMP
GHPRSLQPGD FFALLVRCKE ESLADTPVLG EQRAPEVQVV DQAGPEESGP DLDLDPVEEQ
VVAFLRTHTR AEEQDLRTLL GTRRVSGIVN RLIRKAAAAG VEIIAKQGVG ENGEIYEYVG
R
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