| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0058 |
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| Symbol | |
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| ID | 7272227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 61115 |
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| End bp | 62860 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643568715 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002465175 |
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| Protein GI | 219850743 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTT TCGAATTTCT TTTCATCACC TCCTCATTAC TTCTTATTTT GCTTGGAATT
TTTGTTTTCA CCCGGGACCC GAAAAGTCCC CTGCACCAGG CATTCCTGTT GTTAACCCTT
GGTGCGTTCT GGTGGGCGTT CTCCTTATTC ATGTTCAGGT ATTCATCCAC CTATTCCGAA
GCTTACTTCT GGATGAGAAT GAGTGCCTTC TGGACGTTTG TCCCTGCTTT ATCGTTGAAT
TTTATCTGGA TATTCAGACG ATCTGCTGCA CAACGGGGGA GTATCTGGAT ATATCCGTTC
ATATACATCC CTGCAATAAT CTTCTGCATC CTTGAACTGG TAACGGATGT TATCAATGTC
AGACCTGTCA GTGAATATTG GGGATATTCC TTTGGTCTGT CAGAAAACCT GTGGATCTAT
TATATCGAAC TCGCATGGGC ATTTAGCCTG ATCATCATCT CACTGCTCGT CTGCCTTCAC
TATTACCTGA GTACTCGTGA TATCCGGAAG AAGAAGCAAT CCCAATTTAT TTTGATTGGA
TTTGCTTGCC CTGCGATTGC TGTTTTCATG TATCTCATCA TATTGCCAGT TTTCGGCATC
GCGGTTCTAC CGGTCATCAG CATCGCTTTT CCAGAGATAG TCATTATTTT TGTCCTCATC
TTCTCCATCT TTGTCGGGTA TGCGATCTGG AAGTACGATC TCTTTGTCCT GACACCTGCG
ACAGCGGCCG ACACGATCAT CTCCACCATG ACAGACCTGT TGATCATGCT GGATGGAGAA
GAGAACATCG TTGTGGTGAA CCGTGCGACG AGGGAGATGC TTGGATATAC TGAAGATGAA
CTCATCGGAA GTCCAGTGAG CATATTGATC GGTGACCACC CTGAAAAACC CGATTTTTTG
GCTGATATAA TCAACAATGG GGGTTCGCTC TCTGATATAG AGATGGTATG CCGGAAAAAA
GACGGGACCG CCATGCCTGT CAGTGTTTCC GGTTCGGTCA TTAGTGATAA TGCCCGGAGC
ATCTCCGGCG TTGTCATCGT ATTACGGGAC ATCACCGAAC GGAAACAGGC GGAGAATGCA
CTGATACTGG TATTGGAAAA ATTGAAAAAA ATTAATCTCC TCTCCAGCAT CACCCGGCAT
GATATCCTCA ACCAGCTGAC TGTACTGAAA GGCTATCTTG AGCTCGCAGA GACACTGGAA
CATGATCAGG ATATCGTCAT GTATCTAAAA GAGATGCAGG AGATAACTGA TGTGATCGAC
GAACAGATAT CGTTTATGAA GGATTACGAG GAGATGGGCG TGCGGGAACC TGTATGGCAT
GATGTTGCTG CAGGAATTCG GCGATCCATT GCCTCCCTCC CGATGCGAAA TGTCAGGACG
GTGATCGATA TGCATGGTGT AGAGGTGTTT GCTGATCCGC TCTTTGAGAA GGTATTCTAC
AACCTCATCG ATAACGCGTT ACGGTATGGT GGGGAGAATC TTACCATAAT CCGATTCATG
GCCACTGAAT CTGGTGCGGG AATCCTACTT GTCTGTGAAG ATGATGGCAG CGGGATCTCT
CCTGATGACA AAAAAAACCT GTTCATGAAA GGATTTGGGA AACATACCGG TCTTGGTCTC
TTCCTGGTCA GGGAGATCCT TTCGATCACT GGTATCACCA TCACCGAGAA CGGGGGGTCG
GGACAGGGAG CCCGGTTCGA GATCATCGTG CCGCAGGAAG CGTACCGGTT CCCCGACATG
CACTAA
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| Protein sequence | MNFFEFLFIT SSLLLILLGI FVFTRDPKSP LHQAFLLLTL GAFWWAFSLF MFRYSSTYSE
AYFWMRMSAF WTFVPALSLN FIWIFRRSAA QRGSIWIYPF IYIPAIIFCI LELVTDVINV
RPVSEYWGYS FGLSENLWIY YIELAWAFSL IIISLLVCLH YYLSTRDIRK KKQSQFILIG
FACPAIAVFM YLIILPVFGI AVLPVISIAF PEIVIIFVLI FSIFVGYAIW KYDLFVLTPA
TAADTIISTM TDLLIMLDGE ENIVVVNRAT REMLGYTEDE LIGSPVSILI GDHPEKPDFL
ADIINNGGSL SDIEMVCRKK DGTAMPVSVS GSVISDNARS ISGVVIVLRD ITERKQAENA
LILVLEKLKK INLLSSITRH DILNQLTVLK GYLELAETLE HDQDIVMYLK EMQEITDVID
EQISFMKDYE EMGVREPVWH DVAAGIRRSI ASLPMRNVRT VIDMHGVEVF ADPLFEKVFY
NLIDNALRYG GENLTIIRFM ATESGAGILL VCEDDGSGIS PDDKKNLFMK GFGKHTGLGL
FLVREILSIT GITITENGGS GQGARFEIIV PQEAYRFPDM H
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