Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0054 |
Symbol | |
ID | 7272223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 57747 |
End bp | 58625 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643568711 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_002465171 |
Protein GI | 219850739 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTTT CGCTCATCCA GAAGGACATC CTGATCACCC TGATCACCCT CTATCACCAG CACTCGCACC CGATCAAGGG TGAGGAGATC GCTGAGGTGA TCAAGCGGAA CCCGGGCACG ATCAGAAATC AGATGCAGGC CTTGAAGGCA CTCGAACTGG TCGACGGGGT GCCAGGGCCC AAAGGGGGGT ACAACCCGAC CGCCCGCGCC TACAAGGAAC TGAGCATATC GGTTGCAGAC GGTGAGGCCA AGGTCCGGAT CACCCGGCGG GGAGAGGAAC TCCCTGGCGT CTCGGCGACC GAGATCGACT TCACCACCCT CTGCCACCCG GATGTCTGCC ATGCGGTGGT GAAGGTGATC GGATCGGTGA AGGGGTTTGA TATCGGCGAC CAGGTGGCCA TCGGCCCGAC GCCGGTGAAC AAACTCTTTG TGCGGGGCGA GGTCTTTGGG AAGGATGAGG TCGACCAGGG GTTGATCATC TCGATCTCAG AGATGATCTC ACTTCCAAAG CTGCCGATCC GCTGCTACAT GTCGACACCG CTCCTGACGC TCGCCACCAG TGCGACGATC AGCGAAGCGA TCCATCTCTT CCATACCAGA AACATCCACG GGGCTCCGGT GATGGACGAC GAGGCGATGA AAGGAATCGT TACGATCTCT GACATCGTCC GGGCGATCGA CGAGGGATTG CCGGTCAGTG CACCCGTCTC GACGGTGATG ACCCCCGACG TGATCGAAGC CGACGGCGGG GTTCGCCTCT TCGAGGTGGT GAAGCGGTTC AAGGAGCGGG AGATCGGCCG TCTGATCGTC GTCGAGAACG GGAGTCCGGT CGGGATCCTG ACCCAGTCAG ACGTGCTCCG CGTCTTCCCG ACAGACTGA
|
Protein sequence | MDLSLIQKDI LITLITLYHQ HSHPIKGEEI AEVIKRNPGT IRNQMQALKA LELVDGVPGP KGGYNPTARA YKELSISVAD GEAKVRITRR GEELPGVSAT EIDFTTLCHP DVCHAVVKVI GSVKGFDIGD QVAIGPTPVN KLFVRGEVFG KDEVDQGLII SISEMISLPK LPIRCYMSTP LLTLATSATI SEAIHLFHTR NIHGAPVMDD EAMKGIVTIS DIVRAIDEGL PVSAPVSTVM TPDVIEADGG VRLFEVVKRF KEREIGRLIV VENGSPVGIL TQSDVLRVFP TD
|
| |