| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0050 |
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| Symbol | |
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| ID | 7272219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 52349 |
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| End bp | 53446 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643568708 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002465168 |
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| Protein GI | 219850736 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCA TGAACCATGA CTTGCAAGGA CTGTTATCTG ATCTGAAAGG CGGCCACCGG
CTCGGTGAGG ATGAAGCGTT GATGCTCTTC GAGACCCGGG GCCGAGATAT CTGGACGATC
GCAGCAGCGG CCGACGAGCG GCGGGAGGCG GTGGCCGGCG ACCCGGTCAC CTATGTCAGA
AACCAGAACA TCAATGTCAC CAACCTCTGC GTCAATGCCT GCGGTTTTTG TGGGTTCTCA
AAGAAGCCCG GGGATGACGG CATCTATTAT CATAGCCGCG AGGAGATCCA GCAGAAGGCT
GCGCTGGCGA AGAGCCGAGG GGTCTCCGAG ATCTGCACGG TGAGCGGGCT GCATCCCCAT
TTCACGGCCG AGTCCTATAT CGAGATCTAC CGCTGGATCA CGGAGGCGGC ACCGGGGATT
CATCTCCATG CGAGCAATCC CATGGAGGTT GCGTACGGGG CGGAGAGGAG CGGGATGACC
ACACGGGAGG TGTTGACCGG GATGAAGGCG GCCGGCCTCT CCTCGATGTG TGGAACAGCG
GCTGAGATCC TGGTTGACCC GGTCAGGGAT ACGATCTGTC GTGGAAAGAT CCCGACCGAT
GAGTGGGTGC GGATCATCAG GGAGGCCCAC TCCTTAGGCA TTCCCACCAC GGCCACGATC
ATGTACGGCC ACTGTGAGAC CGAGGCCGAC CGGGTCCGAC ATCTGGCGAT CCTCCGGGCG
ATCCAGGATG AGACCCATGG GTTCACCGAG TTCGTCCCGC TCTCGTTCAT CCACATGAAC
ACCCCGATCT ACCGTCAGGG GCTCGCCCGG GCCGGCGCGA CCGGGAGGGA GGATCTGTTG
ATGGTCGCCG TCGCCCGCCT CTTCCTCGAT AACTTCCGAA ATATCCAGGT CTCATGGGTG
AAGGAGGGGA TCAAGATGGC GCAGTTGGGC CTCATCGCCG GGGCCAACGA CCTGGGGGGG
ACGATGTACG AGGAGAGCAT CTCGAAGGGG GCCGGCGCGA CCAACACTGA CTACCTCGAT
CCGGCAGAGA TGCAGCGGGT GGCGGAGGAT CTCGGGAGGA TGCTCGAGCG CCGGACGACG
CTCTACGACA TGTGTTAA
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| Protein sequence | MRTMNHDLQG LLSDLKGGHR LGEDEALMLF ETRGRDIWTI AAAADERREA VAGDPVTYVR
NQNINVTNLC VNACGFCGFS KKPGDDGIYY HSREEIQQKA ALAKSRGVSE ICTVSGLHPH
FTAESYIEIY RWITEAAPGI HLHASNPMEV AYGAERSGMT TREVLTGMKA AGLSSMCGTA
AEILVDPVRD TICRGKIPTD EWVRIIREAH SLGIPTTATI MYGHCETEAD RVRHLAILRA
IQDETHGFTE FVPLSFIHMN TPIYRQGLAR AGATGREDLL MVAVARLFLD NFRNIQVSWV
KEGIKMAQLG LIAGANDLGG TMYEESISKG AGATNTDYLD PAEMQRVAED LGRMLERRTT
LYDMC
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