| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0030 |
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| Symbol | |
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| ID | 7270142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 28010 |
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| End bp | 29257 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643568689 |
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| Product | domain of unknown function DUF1743 |
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| Protein accession | YP_002465149 |
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| Protein GI | 219850717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.574702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG GGATCGACGA CACCGATTCA CGGGAGGGGA TGTGCACCAC CTACCTCGGG
GCGGTGCTGA TCAGCCGGCT GAAGAAGGCT GGGTTTACGG TCAGAGAGGT CCGGCTGATC
CGGCTGAACC CCAACGTCAA GTTCAAGACC AGGGGAAACG CAGCCATCGC CATCGAGGCT
GATGGAGATC TGGAGGAGGG GTTCGCACTC GCCTGTGCTG CCGTCGAGGA ACTGGCGGAG
TTCGATGGGG TCGAGACGAA CCCCGGCGTG GCGGTGGTGG CTGAACGGCC CGACCCTGCC
TTCTATCACC AGGCACTGCA GGACTTCTGC ACGATCGCCG AGGCAGAGGC GGTGCTGGAG
ACCTGGGGCG CCCGGTACCG GGGCTATAAG AACAGGAGAG GACTGATCGG GGCGGCAGCG
GCGATTGCGA GCGACCTCCC CGATTCGACC GCCGAACTGC TCGCCTACCG GGACCCGTCC
TGCTGGGGGA CCCACCGACA GATCGACGAA GAGTCCTTCT TTACGGCAGA GGCGGCGACC
TTCCCGCAGA CATGGGACAC GGTGGATACG GTGAACAGCA CGGTGGTCTG CGTGCCGCAC
ACCCCCGACC CGGTCCTCTT CGGAATCCGG GGGGTCTCAC CTGCCTGGGT GACGCTGGCC
AGGTCGTACC TGGAGACCGA ACTGCCAGCC CTCGAGCAGA TCTACCGGAC CAACCAGGGA
ACCGATGCCC ACCTGGTCGA AGGGGTGATC GGCAGACTGC TCGACGGGCG GTCGTACCGT
CTGGACGGGA CCGTCACCGC AGTGCCAGTC ACCGGCCAGG GCGGGCATGT GACCCTGCTC
CTCGAAGGGG AGGACGGTGC GACCCTGCCG GCAATGGCCT ACGAACCAAC AAAGGGCTTC
CGCGACATCA TCCGAGCCCT CATCCCGGGA GACCAGGTGG CGGTGACCGG GAGTTACAAG
GGGGGATCAC TGAACCTGGA GAAACTGCAG GTCCGGACGA TGGCTGACGC AGTGACCCGC
CGGCCGCCGC TCTGTGCTGC CTGCACCCGG CGGATGACCA GTGCAGGCCG CGGACAGGGG
TACAAGTGCC GGCACTGTGG CGAAAAGAGC GCAGAGCCCG AGGTGAAGAT GCAGCAGCGA
ACCCTCGCCT GCAGATGGTA CGAGGTACCT TCGGTGGCTC GCCGGCACCT GGCAAAGCCC
CTCTGCAGGG GAACCGGCCC TGCTCCGGAC CCCTGCCCTG AACAGTGA
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| Protein sequence | MIIGIDDTDS REGMCTTYLG AVLISRLKKA GFTVREVRLI RLNPNVKFKT RGNAAIAIEA
DGDLEEGFAL ACAAVEELAE FDGVETNPGV AVVAERPDPA FYHQALQDFC TIAEAEAVLE
TWGARYRGYK NRRGLIGAAA AIASDLPDST AELLAYRDPS CWGTHRQIDE ESFFTAEAAT
FPQTWDTVDT VNSTVVCVPH TPDPVLFGIR GVSPAWVTLA RSYLETELPA LEQIYRTNQG
TDAHLVEGVI GRLLDGRSYR LDGTVTAVPV TGQGGHVTLL LEGEDGATLP AMAYEPTKGF
RDIIRALIPG DQVAVTGSYK GGSLNLEKLQ VRTMADAVTR RPPLCAACTR RMTSAGRGQG
YKCRHCGEKS AEPEVKMQQR TLACRWYEVP SVARRHLAKP LCRGTGPAPD PCPEQ
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