| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0028 |
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| Symbol | |
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| ID | 7270140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 26366 |
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| End bp | 27016 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643568687 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_002465147 |
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| Protein GI | 219850715 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.684856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.332219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATC TGATCCTCGC CCTCGACCTG CTCGACCCGA TGTATGCCCG CGAGGTGGCC
GAGTCCTGCG CGGCCTCGCT GGACGCCATC AAACTCGGCT ACCCACTGAT CCTCTCGGCG
GGTCTGGGCG TCGTCAAGGA CCTCGCCGAC CTCGGGTTGC CGCTGATCGC GGACTTCAAG
GTGGCCGACA TCCCCAACAC CAACGGGCTG ATCGCCAACC AGGTCTTCTC GGCCGGGTTC
GATGCGATCA TCTGCCACGG ATTCACCGGC AGAGACGCCG TGGAGGCCTG TGTAGACGCG
GCCCATGCCT ATGGTGGAGA ATGTTTCGTG GTGGCGGAGA TGTCCCACCC AGGGGCCCTC
TCGTTCTTCT CCCGCGGGGT GGCCGAGCAG ATCGCAACCC TGGCGGTGGA ATGCAGGGCC
GACGGGATCA TCGCCCCGGC CACCCGACCG GAACGGATCC GGGCCCTCCG CAGTGTGGTC
CGATCGAGAA AGATCTACAG CCCCGGCATT GGTACGCAGG GCGGCGACCT TCGTTCGGTG
CTCCCGCTGG TCGAAGGGGT GATCGTCGGC AGGACGATCT ACGGGGCGGC TGACCCTGCA
AAAGAGGCAG CAGTGATGGC AGCGATCGTC AATGATGAAC GATCATCCTG A
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| Protein sequence | MADLILALDL LDPMYAREVA ESCAASLDAI KLGYPLILSA GLGVVKDLAD LGLPLIADFK
VADIPNTNGL IANQVFSAGF DAIICHGFTG RDAVEACVDA AHAYGGECFV VAEMSHPGAL
SFFSRGVAEQ IATLAVECRA DGIIAPATRP ERIRALRSVV RSRKIYSPGI GTQGGDLRSV
LPLVEGVIVG RTIYGAADPA KEAAVMAAIV NDERSS
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