| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0024 |
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| Symbol | |
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| ID | 7270136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 23437 |
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| End bp | 24669 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568683 |
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| Product | nucleic acid binding OB-fold tRNA/helicase-type |
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| Protein accession | YP_002465143 |
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| Protein GI | 219850711 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.105485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTT CCGTAATAGC TGAGAGAATC TCCCAGAAGA TTCAGTCCAA AGGCAAAAAC
CCCGACCAGG CAGCGATCGA AGCGAAGCTC CGCCGCCTGA TCGAGGAGTT TGGGGTCCAG
CCTGCCGAGG CAGAGCGGAC CGTGATGAAC GAACTCGCCA AGGAGTTTCA GTTGACCGGC
GTGGTCAGCA TGGCTTCAGA CCTCCGTGGC CTGGGTGAGG TGCTTCCAGG TGAGTGGGTC
ACGATCGAAG GGAAGGTGGT CTCCCTGACC ATCCCACGTA CCCCTGCGAT CGGACAGACC
GGGATCCTCG CGGACTCCAC CGGGGCGATG CAGTTTGTGA TCTGGGCCAA GGCAGGAGCG
CCACTCCTCG ACTTAGGGGA GTGGTACAAA CTCGAATCAG CTGTGGTCGA CGAGTTCCGG
AGCGTTCCGA ATGTGAAGGT TCATTCCGGA ACGACCGTCA GCCATGTCAC CCATGATCAG
CCACTCGTGC CGACGATAAT CCCCGTGCAG ACCCTCCATC CAGGGGTCGG CAGCGTGCGG
GTGAAGATGG TGCAGGAGTG GGAGCCCTCG CATGAACGGA TGCTGCAGAC CGGGATCATC
GGCGACGAGT CCGGGACGCT GAAGTTCACG ATATGGCGCG AGGAAGGAGA AGGAAAGGAG
AAGCTCCTCC CTGACACCGT CTACAATATC TACTATGCTC AGGTCGACGA GTACAACGGC
CGTCTCTCGC TGAACCTGAA CAGCGCGACT GTCATCCCTG ACGAGGGGGA TATCGAGGTC
GGAACCGGGG GAGCAGCCTT CTCAGGGGCG CTCGTCCACA TCAGCCAAGG TTCCGGGCTG
GTCAAGCGCT GTCCGGTAGA GGGGTGCAAC CGGGTCCTCT CCAGGCAGAA CTACTGCCCA
ATCCACGAGA TGCAGCCGGA GTTCCGGTAT GACCTCCGGA TCAAGGGTGT GCTCGACGAC
GGCGAGAAGA CCAGGAACGT GCTGATGCAG CGCGAGGTGA CCGAACAGGT GACCGGGATG
ACCCTGGAGG CTGCTCAGGA GATGGCAGAG AACAACCCGC TCGGAGCTGA TGAGGTTTTT
TATCACCTCT GCAACACCGT GATGGGCAGG TACCTGACCT GCAGAGGCCG GGAGATGGAT
CAGGTGATGC TGGTCAACCA GTGCGAACCG CAACACCTGG ACCAGACAGC CCTGGCTGCG
CTGATCAACC GTGCCGGAGG TGAACAGGCA TGA
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| Protein sequence | MDISVIAERI SQKIQSKGKN PDQAAIEAKL RRLIEEFGVQ PAEAERTVMN ELAKEFQLTG
VVSMASDLRG LGEVLPGEWV TIEGKVVSLT IPRTPAIGQT GILADSTGAM QFVIWAKAGA
PLLDLGEWYK LESAVVDEFR SVPNVKVHSG TTVSHVTHDQ PLVPTIIPVQ TLHPGVGSVR
VKMVQEWEPS HERMLQTGII GDESGTLKFT IWREEGEGKE KLLPDTVYNI YYAQVDEYNG
RLSLNLNSAT VIPDEGDIEV GTGGAAFSGA LVHISQGSGL VKRCPVEGCN RVLSRQNYCP
IHEMQPEFRY DLRIKGVLDD GEKTRNVLMQ REVTEQVTGM TLEAAQEMAE NNPLGADEVF
YHLCNTVMGR YLTCRGREMD QVMLVNQCEP QHLDQTALAA LINRAGGEQA
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