| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0018 |
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| Symbol | |
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| ID | 7270130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 16309 |
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| End bp | 18897 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643568677 |
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| Product | SMC domain protein |
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| Protein accession | YP_002465137 |
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| Protein GI | 219850705 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0623828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACC TGGTACACCT CCGGATCCAG AACATCCGGA GTTATGGCGA GGAACCGATC
ACGATCGACT TCTCACCCGG GATCTCCCTC TTCTCAGGCG ACATCGGGAG CGGAAAGTCG
ACGATCCTCT CGGCCATCGA GTTCGGCCTC TTCGGCCTCG GCGACGTGAA GTCGACCCAC
CTCCTCAGGC ACCACCAGAA ACGCGGGGAG GTCAGCCTCA CCTTCATCAC TGGCGAGGAG
GAGTACACCA TCAACCGGAC ACTGGTCAGG ACCAAGAAGG GGGTGAACCA GGGGCCGTGC
TCACTAACCG GGCCGAATGG CGAAGAGGCC TACGCACCCG CCGACCTTAA ACCGAAGGTG
CTCGCGATCC TCGGGTTCCA CGAACAGCCC GACCCCAAGG CCACCTCTCG AATCTTCCGG
TACGCAATCT ACACTCCCCA GGAGGCGATG AAAGCGGTCC TCTCGATGAA GGAGGAGCAG
CGGCTCGACA TCCTCAGAAG GGCATTTGGG ATCGAACAGT ACCGGTGGGC GGCCACCAAC
ACCGAGGAGG CTGTGATCAG GCAGTGGCTG AACACGGAGA TCGAAATCTG TACCCGCCTC
TGCACCGGAT TGGAGGAGGA CGAGCGGCAG TATGAAGAGG TGCTGCTCGG ATGCCAGCAG
GCCAGGGCCG GGGTGACAGA ACAGGCAGCA CTCCTCGCTA CCCTGACCGG GGCCGTCACC
CGAATCGACG AGGCGATCGC CTCCCTCCTT CCATTCCAGG AGAAGGTCGG CACCCTCCGA
GGTTCCCTCC CCGGTCTGAC CTCGGCCAGA GAAGCCAGGC AGGCACAGCG CCAGGGGCTG
CTCGATGAAG AGAAGCGGAT CGATAGAGAT CTCATCTTGA TCGCAGGTGA CGAGGAGGCC
CTGGCCCAGC TAAAGCCGAA GTATCAGCAT CTCCTGGAAC AGAAACGGGC GATAGTCACC
CTTGAAGAGC GTTATCTCTA CCACCGGGAT CTGCAGGGTA GGGAAGCAGC CCTCACAGCC
CGGATCAGAG CTGAAGAGGA ACACCTGAAG GAGCGGGCAG GCCGGTGCCA GAGAGACCGG
GAGCGGGCGC AGGCGATCCA TGATGAACGG CAGAATCTGG CCCGACAGCA GCAGACGATC
AGCGCGGCCC TAAAACCCCT CAAAACGGCG GTGGCGCGGT TGCCGGAGGT GACCGCCCGG
GTGAACACCC TGGTTCAGGG GAGGGAGAGG ATCCGAGTTG AACGGGAGAC CCAGGAGAGG
AGCTTGAAGA CCCTGAAGAC CGAATGGGAG CAGATTGCCG CCATCGGGGA GGGAGCCACC
TGCCCCCAGT GCCAGCAGAC CCTGACCAGA GAGCACCTGG TCGCGATGGA GCAGGAGACC
TGGGCGAAGG CCGACGAGAT CCTGGGCTGG CAGCGGGATC TCGCCGGACT GCTCAAGGAG
GCCGATGAGA TGATCAGCAG TGCCCGGATC GAGCAGGCAG CGCTCGAAGA GGAGCAACGG
ACCTGCAACA GGAAGAAGAC CGAGCTCGCT GGTATCACAG CCAGAATAGG CGGACTGCTA
CAGGAGGAGG AGCGGCTCGG CACTGCAGTC GACGAGGAGC AGAAGATCCG GGAGGCGCTC
ACCACCGGCA CCTTCGCCCT GGACCTGCAA CAGCAGCGTC AGGATGTCAC CTCCGCGATC
GAAGCTCTCA CCGACGAGGT GACGAGGTAC ATCCAGGCAA AGAAAACGAT CCGGGACCTC
GAAGAGGAGG AGGTCGAGAA GACCTTTTCA GCCCTGAACG CCAGAATCAA AACAAAACAG
GGGCTCCTTG AGCGGAGGAA CGCCAACGCG GAAGCGATCC GATCGGTCGA AACTGATATT
CTGGACCTTG ACAAAGCGAT CAGAACAGGA GAGGAAGCCC TCGCCGACGC CGAGGTGAAA
CTTCAGGAAC TTTTTGACCT GGAGACGACC GCGACCAGGC AGCGGGATGT CATCCAGGAA
CAGCAGCAGG TGCTGGACCA ACTGCGGCGG GAGGTGGAGT ACCAGACCAG AACCAGCGAA
GATCTGAAGA AGGTTATCCT GGAGAAACGA GCGAAGGCCG GTACGATGCA GGTCTTCCAA
GAGCAGCGGC GATGGCTCCG CGATCACTTC CTCCCAGCCG TCGAATCGAT CGAACGATCC
AGGCTGGCCC AGATCAACGA GACCTTCAAC TGCTTCTTCC AGCAATGGTT CACCGACCTG
ATCGCAGCGG AGGAGATCTC GGTCAGGGTC GACGAAGCCT TCACCCCGCT GGTCGAACAG
GACGGCTTTG AGGTGGATGC AGACAGCCTC TCAGGTGGGG AGCGGACCTC GCTGGCGCTG
GCCTACCGAT TGGCCCTGAA CACCATCGTC AGAGATGAGA GCGGGGCCGA CCAGAAGTCC
CTGCTGATCC TTGACGAACC GACCGACGGG TTCAGCGCCG GTCAGCTCTA TCGGCTGCGG
GATATCCTCC TCGACGCCGG TTGCGACCAG TTGATCATGG TATCGCACGA GAAAGAACTC
GAAGGGTTCG TCGATACACT CTACCGGGTC ACCAAGGTAG ACGGGATATC CTCAGTCGTC
AGACGGTAG
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| Protein sequence | MLHLVHLRIQ NIRSYGEEPI TIDFSPGISL FSGDIGSGKS TILSAIEFGL FGLGDVKSTH
LLRHHQKRGE VSLTFITGEE EYTINRTLVR TKKGVNQGPC SLTGPNGEEA YAPADLKPKV
LAILGFHEQP DPKATSRIFR YAIYTPQEAM KAVLSMKEEQ RLDILRRAFG IEQYRWAATN
TEEAVIRQWL NTEIEICTRL CTGLEEDERQ YEEVLLGCQQ ARAGVTEQAA LLATLTGAVT
RIDEAIASLL PFQEKVGTLR GSLPGLTSAR EARQAQRQGL LDEEKRIDRD LILIAGDEEA
LAQLKPKYQH LLEQKRAIVT LEERYLYHRD LQGREAALTA RIRAEEEHLK ERAGRCQRDR
ERAQAIHDER QNLARQQQTI SAALKPLKTA VARLPEVTAR VNTLVQGRER IRVERETQER
SLKTLKTEWE QIAAIGEGAT CPQCQQTLTR EHLVAMEQET WAKADEILGW QRDLAGLLKE
ADEMISSARI EQAALEEEQR TCNRKKTELA GITARIGGLL QEEERLGTAV DEEQKIREAL
TTGTFALDLQ QQRQDVTSAI EALTDEVTRY IQAKKTIRDL EEEEVEKTFS ALNARIKTKQ
GLLERRNANA EAIRSVETDI LDLDKAIRTG EEALADAEVK LQELFDLETT ATRQRDVIQE
QQQVLDQLRR EVEYQTRTSE DLKKVILEKR AKAGTMQVFQ EQRRWLRDHF LPAVESIERS
RLAQINETFN CFFQQWFTDL IAAEEISVRV DEAFTPLVEQ DGFEVDADSL SGGERTSLAL
AYRLALNTIV RDESGADQKS LLILDEPTDG FSAGQLYRLR DILLDAGCDQ LIMVSHEKEL
EGFVDTLYRV TKVDGISSVV RR
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