Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0013 |
Symbol | |
ID | 7270125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 11654 |
End bp | 13051 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643568672 |
Product | tRNA CCA-pyrophosphorylase |
Protein accession | YP_002465132 |
Protein GI | 219850700 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.099852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGAGG AGGAGATCCA GCCAGTGCTC GCCCGGGTCA TCGAACGGAT CCGGCCTGAG GCCGAAGAGG TGGCGGCGAT CTGGCAGGTC GCAGACAGGC TTATCGCTGC AGTCATAGCA TCCGGTGCTG CAGAACCGAT GGTGGTCGGT TCGGTGGCTA GGTCCACCTT TGTTCGAGGC GACCGGGATC TGGACCTCTT CATGCTCTTC CCTCCCGATC TCCCGCGGGA AGCGCTCGAG GGGCAGGGGC TTGGTCTAGC CCGCTCGCTG GCTGATCAGT TCGGGGGAAA TTACCAGGAG AAGTACGCCG AGCACCCGTA CATCAACACC ACCATCGATG GAATCGATGT CGACCTGGTC CCCTGTTATA AGGTCACCTC TGCGACGGCC ATTCAGTCGG CGGTGGACCG GACACCGTTC CACACTCGGT ATGTGATCGC ACGGATCGGA AATTTGGCCG ACGATGTGCT CCTGCTCAAA CAGTTCGCCA AGGCCTGTGG TGTCTATGGT TCAGACCAGA TGACCGAGGG GTTCGCCGGC TACCTCTGCG AACTACTGGT CCTCCACTAT GGCGGGTTCC TGCAGGTAAT GGCCGCGGCT GCTGGGTGGC GGTCTAGGAC CGTCATCGAT CTGGAGCAGC ATGCGACCAA GACCTTTGAT GAGCCGCTCG TCGTCGTCGA CCCGGTCGAC CCGAATCGGA ACGTCTCCGC CTCGGTCTCC CTCTCCAGAA TGTTTGAGTT CGTGGAGATG GCCCGCGGGT TCCTTGAGCA CCCTGGAGAA GAGTTCTTTG TAATTCCAGA TCCAGAACAG ATCAGCAGAG AAGATCTCTC TGCAGCGCTT GAGGTTAGGG GGACCTGCCT CTGTGCCGTG ACCTTTGCGA CTCCCCCGTT CATCGAGGAT GTGGTGGTCC CGCAGCTCCG TCGCTCCCTT GATGGTACCT GTCACCTGCT CGAACGGTCA GGATTCATGG TCAACCGGGC GGACGCCTGC ATGGGGGAGG AGCAATGTCT CCTCCTCTTT GAACTGCTGG CCCCGTCGGT GGCCCGTGTC AGGCGGCATA TCGGCCCGCC ACTCTCGAGC CGGGATAATG CAGAGAAGTT CCAGAAGAAG TACAGCGATC CTTCCCTATC CATCACCGGG CCGTACATCG AGGACGGGCG GTATGTGGTC GAGGTGCTTC GCCAGTTCAC CACCCCGGAG ACGCTGCTTG GTTCGGAGCT GCTTCTTACG GTCTCGCATG GAAAGCATGT CCGTCGATCG CTGAAGAAGG GATGGCAGGT CAGGCTGGGG GATGACTGCT GGTCAGAGGA GTTTGGATGT TTCTTCAACG CATTTATGAA TGCCTCGTCC CCGCTGGTCC GTCTTCTCAA GAGAGGGGCC GACGGGGGCC AGGACTGA
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Protein sequence | MNEEEIQPVL ARVIERIRPE AEEVAAIWQV ADRLIAAVIA SGAAEPMVVG SVARSTFVRG DRDLDLFMLF PPDLPREALE GQGLGLARSL ADQFGGNYQE KYAEHPYINT TIDGIDVDLV PCYKVTSATA IQSAVDRTPF HTRYVIARIG NLADDVLLLK QFAKACGVYG SDQMTEGFAG YLCELLVLHY GGFLQVMAAA AGWRSRTVID LEQHATKTFD EPLVVVDPVD PNRNVSASVS LSRMFEFVEM ARGFLEHPGE EFFVIPDPEQ ISREDLSAAL EVRGTCLCAV TFATPPFIED VVVPQLRRSL DGTCHLLERS GFMVNRADAC MGEEQCLLLF ELLAPSVARV RRHIGPPLSS RDNAEKFQKK YSDPSLSITG PYIEDGRYVV EVLRQFTTPE TLLGSELLLT VSHGKHVRRS LKKGWQVRLG DDCWSEEFGC FFNAFMNASS PLVRLLKRGA DGGQD
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