| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0012 |
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| Symbol | |
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| ID | 7270124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 11118 |
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| End bp | 11657 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568671 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_002465131 |
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| Protein GI | 219850699 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0833472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAGGG CTTTCATCGG AATTGACCTT CCTGCATCGA TCAGGGAGGA GATCGCGGCT
GTGCAGCCGG CGCTTCGGGC TGTACCGGCA GACATCTCGC TGGTCAATCC TGCGATAATC
CATATCACGC TCCGCTTCAT CGGCGAGGTC ACTGAGGAGG AGATTGGAAG GATCAGTGCC
GCCCTGCAGA CGATAAAGGT CAAACCGTTC CCGGTCTCGA TACGGCCGGT CACACTGAAC
AGCCGGACAC GGCCCAGGGT GATCTGGTGT GGTGTTGAAG ATCAAGGGCG ATCTGCGGCG
CTCCATCAAG CAATCGAGGC TGTGCTCTCC CCACTCGGGT ACGAGCCTGA AGCCCGGGCC
TTCACCCCCC ATGCGACGGT CGGGCGGATC CGACGGGGCC ACTCCTCCCT CGAAGGGGTC
ATCGATTCCC TTGGTCAGAA TGGGTTCGGT GACTTCGAGG TCGGGGAGTT CAAACTCAAA
CAGTCCGTGC TGACGGCCAA GGGCCCGATC TATACCGATC TCTGCGTGGT GACGTTGTGA
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| Protein sequence | MVRAFIGIDL PASIREEIAA VQPALRAVPA DISLVNPAII HITLRFIGEV TEEEIGRISA
ALQTIKVKPF PVSIRPVTLN SRTRPRVIWC GVEDQGRSAA LHQAIEAVLS PLGYEPEARA
FTPHATVGRI RRGHSSLEGV IDSLGQNGFG DFEVGEFKLK QSVLTAKGPI YTDLCVVTL
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