| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0011 |
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| Symbol | |
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| ID | 7270123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 9632 |
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| End bp | 11077 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643568670 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002465130 |
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| Protein GI | 219850698 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.099852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATCA CTCCTGTCCG GAGACAGTCG TTCATCGGGT TCATGTCAAC CATCGGCTCG
ACGATTGTCG GATTCATCTC GACGGTTTTT ATCGCCCATG TGGCCGGTGC CGGCCCGCTC
GGGGCCTTCT ACCTGCTCAC CGCTTATACA AACATCCTCA ACCTGATAGC CGACGGTGGC
ACAGGTGGGG CGGCGGTGCA GCGGATCGCA GAGGGAGATG AGGAGAACGC TTACTTCTCA
GCCTTTGCCG CGGTTCGGTT GCTCCTCTGT CTGCTGACCA TCGGTGCACT GTTGATTGCC
CGCCCGTTCC TGGTGAACCT GGACCAGGCT GGCCTCTTCC CCTGGCTGGT CATCACCGTC
CTGGTCGGCA CTGTCAGCGC GCTGGCCGTG ACTGGGGTCT ATGGCAGGGG GAAGGCCGGA
GTCTCACAGA TCGCCGACCT GACCGGCACC ATCGTCAGGG TGATCGGGCA GGTGGCCCTG
GTGGCGCTGG GCTATGAAGT GGCTGGCCTG GCCGGGGGGA TGGTGGCAGG TCTCGTTGCG
GCTACACTCG TCGACTATCG GTTCCTCGAC CTCTCCTTCG TCAGGTTCCA GTGGCGGCAC
CTCATTGGCC TCTGGTCGTT CGCGGTCTGG TCGTTCCTCG GCGGGATCAC CGCCGTCGTC
GTCGGGTCCG TCGATACGAT CCTGCTCGGT CACTTCCTTC CGAACAGCGA TGTCGGGTTC
TACCGGACCG CCTTTCAGCT CGCGACGATG GCCCTCTTCA CCACCCTGGC GGTCAGGTCC
TCGCTGGGGC CGCGGATCAC TCGGTGGTTC CGGGAGGGAG CGATCCCGGC GATCGAGGAA
GCGCTGGCCC GGGCCTTCAC GTACGCGTTT CTGCTCGCGG TTCCGGTCTG CACTGGTGGT
TGGCTGCTCG GGGGACGACT CCTCTATTAC CTGTATGGGG AACCGTTCGT GGCCGCCACC
CCGGCCCTTG CCGTCCTCTT CGCCGCTGAG GCGGTGACAA TCCTGGTGAC CCTGGAGGGG
ATGTGCCTCG GCTCGATGAA TCGCCCGCGC GAGACCGTCA CCGCCGCAGC TGCCGCGGCT
GTCGTGCTGC TCCTGCTGGA CCTGTTGTTG ATCCCCCTGA TGGGGATCAC CGGGGCCGCT
GTCGGGCTGC TCGCCTCGAT GGTGATGAAC TGGGTGCTCC TCCACCGCTC GCTGAAGCGG
CAGATGGTGG TCAGAATAGA ACGGCACTCA ATCCAGGTCA TCCTCTCCGC ATCGATGGTG
ATGGGAGCGG TGGTCCTGCT GTACCGGATG GTCGTGTCGA TTGATACACT GCCGGCCCTG
CTCGGGGCGG TCCTCGTCGG TGGAGTTGTC TATGGGGGGC TTGTTCTCAG GGGAGATCTG
GCCGTCCATG ACGAGATAGC GACTCTGGTT CGGGATCTCG GTCTCCCCTG GCCGTCATGG
CTCTGA
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| Protein sequence | MGITPVRRQS FIGFMSTIGS TIVGFISTVF IAHVAGAGPL GAFYLLTAYT NILNLIADGG
TGGAAVQRIA EGDEENAYFS AFAAVRLLLC LLTIGALLIA RPFLVNLDQA GLFPWLVITV
LVGTVSALAV TGVYGRGKAG VSQIADLTGT IVRVIGQVAL VALGYEVAGL AGGMVAGLVA
ATLVDYRFLD LSFVRFQWRH LIGLWSFAVW SFLGGITAVV VGSVDTILLG HFLPNSDVGF
YRTAFQLATM ALFTTLAVRS SLGPRITRWF REGAIPAIEE ALARAFTYAF LLAVPVCTGG
WLLGGRLLYY LYGEPFVAAT PALAVLFAAE AVTILVTLEG MCLGSMNRPR ETVTAAAAAA
VVLLLLDLLL IPLMGITGAA VGLLASMVMN WVLLHRSLKR QMVVRIERHS IQVILSASMV
MGAVVLLYRM VVSIDTLPAL LGAVLVGGVV YGGLVLRGDL AVHDEIATLV RDLGLPWPSW
L
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