| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0007 |
|---|
| Symbol | |
|---|
| ID | 7270119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 6074 |
|---|
| End bp | 6778 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643568666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465126 |
|---|
| Protein GI | 219850694 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.102674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC TCTTGACGAT TCTGCTGATT CTGCTGCTAC TCATTGTTCT GGCAGTCCTC
TACCTGCTGC TGGTCCCGAT CGATCTCCAG GTCACCGGGA CGCTGGACCC TGAGGGGATG
ACCGCAGCAG GCGGTCTCAC CTGGGGGGTA GCCGGGCTTG TGGCCGAGCA CCGACAGGGA
GATCTCAAGA CGGGTGTCTC GCTCTTCGGC CACCGGTTCT GGTTTTCGAT GGAGCGGGGT
CGGCAGAAGC CCGAAGGGTC GGTTAGGTCG AAAGAACCGG AAAAACCGAT TGCATCGGCC
GGGGAGAGCG AAGAGCACCA AGAGAAGAAG CAAGGGTCGT CCGGGCCGGG CGCCGGCGAG
GTGATTGGCA TGGTAGAAGA GGTCTGGCCT CGGATTACCG ATCTGCTCGG GTCGACGTTC
AGGGCACTGG AGATCAGGTC GATCAGCATC GATATGACCT TTGGCCTCTC CGACGCCGCA
AAGACCGGGG AGGTATTCGG GTACCTGATG GCGATTCGGG GAATGCTGAC CCCGGTCCCC
TGGTTCTCGA TGGGGGTGAC TCCGGTCTTT GATACGATTA CCCTCGTCGG TACCGGCTCC
GGCACGCTCA GGTTGAACCA TCCGGGGACG CTACTCGTCC CGGCCGCCCG GTTGCTGCTC
AGCAGACCGG TTTGGCGGAT GATCCGGACG AGGGGTACAT CATGA
|
|---|
| Protein sequence | MPILLTILLI LLLLIVLAVL YLLLVPIDLQ VTGTLDPEGM TAAGGLTWGV AGLVAEHRQG
DLKTGVSLFG HRFWFSMERG RQKPEGSVRS KEPEKPIASA GESEEHQEKK QGSSGPGAGE
VIGMVEEVWP RITDLLGSTF RALEIRSISI DMTFGLSDAA KTGEVFGYLM AIRGMLTPVP
WFSMGVTPVF DTITLVGTGS GTLRLNHPGT LLVPAARLLL SRPVWRMIRT RGTS
|
|---|
| |