| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3845 |
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| Symbol | |
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| ID | 7266325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 4681590 |
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| End bp | 4682147 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643568656 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002465116 |
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| Protein GI | 219850683 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00095099 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000359528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | GTGAGCGATC CACAATGTGA TGAAGTTGAC CTCGTTAACC GAGCATGCGC CGGCGATCAA
TCGGCTTGCG CGCTGATTGT ACAGCGTTAC ACCGGAGTTT TGTATAATCA AGCGTATCGT
ATGCTCGGTG ACGCATTCGA GGCGGAGGAT GCAGTACAGG AGATATTCCT GCGTGCATTT
CGTAACCTGA AGAGTTATGA CCCGTCACGC CGGTTGGTGA CCTGGCTCCT TGCCATCGGC
TCAAACTACT GTATCGATCG CCTACGACGA CGACGGTTTC ACTGGCTCAC ACTCGATGAT
GTCGCCTTTT GGTTGCCAAG CACGCAACCA GGACCAGAAC GGAGCGCGCT ACAGCAGTCT
AGTCGGGAAA TGATTCAGCG CGCTTTGCAG CGTCTGCCCG CAATGTACCG GAGTGTTATT
GTCTTGCGCT ACTGGCACGA TTTATCGTAT GAAGAAATCG GTACCATCCT CGGTCTTACC
GAAGCGACCG TCAAAACACG GCTACACCGA GCACGTAAAA TGTTGCAAGA GGCCCTCGCG
ATGGAGGAGG AGCTATGA
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| Protein sequence | MSDPQCDEVD LVNRACAGDQ SACALIVQRY TGVLYNQAYR MLGDAFEAED AVQEIFLRAF
RNLKSYDPSR RLVTWLLAIG SNYCIDRLRR RRFHWLTLDD VAFWLPSTQP GPERSALQQS
SREMIQRALQ RLPAMYRSVI VLRYWHDLSY EEIGTILGLT EATVKTRLHR ARKMLQEALA
MEEEL
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