| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3843 |
|---|
| Symbol | |
|---|
| ID | 7266323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4680200 |
|---|
| End bp | 4681147 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643568654 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465114 |
|---|
| Protein GI | 219850681 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.262125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000472149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAC GTTGGCTTTT TCTTTTCATC ATCATCTTGA CGTGGGTTGC CGTGCCAAAA
TCGGCTGCTG CCCAGACGCC GACACCGTTC GTGATTGCCG CCGATGAGCT GTATCACGGT
GATATTGCTA CCTTCGATCA ACCGGTGCTC GTGCTCGGCG AGGTTGATGG CGATATAACG
AGCTGGTTTG GTTCGATCAC GGTACGCGGT ATCGTGCGTG GTGATATTGT CAGCTATACC
GGTTCAATTG AGCTAGAAAG CGGCGCGGTG GTGGAAGGGA ATATCCTTTC ACTCACCGGT
GGTGTGACGA TAAAGAGTGG AGTTGAAGCC AATGGTGCAG TGATCGGGAC CGAACCGCTT
GTCAGTTCAA CGGTTACGAC TTCATTGATC AACGTACTGC ATGGTCAAAC TTCAAATCGT
CTCTTTCTCC CGGTGGGAAT AAGCGGTATT ATCGGTGCAA TTATCACTAT CTTGCTTACG
GTAGCGTTGA CGCTGATCTG GCCACGTCGC ACCGCAGGTA TTGGTCGCGC ATTGCGTGCC
GCACCACTGC GCAGTGCGCT GGTCGGTTTT CTCTCGACCG TGCTCATACT CGCGGCATTA
CCGTTTGTCG TTGGCCTTCT GACGCTAACC CTGATCGGGC CAATCCTCTT TCTCCCACTT
AGCCTCCTTA TGCACGTCCC ATATGCGATT GGCTTTACCG GTGTTGCCCG CGCACTTACG
GCTGCCTGGC CGCCGACATG GACACTCAGA CCACCACTGG CTGCCGCGGT TGGTACACTC
ATTATTATCA CACCGCTCGT TGTCGTAAGT ATGGTTGCAC CTGCCGTTGC ACTAGCTATA
GGCTATGCGG TGGCAAGTTG GGGGGTAGGG GCAGCGCTGA TCAGTCGTGG TGGGGCATTG
CCGATCTGGC AAGATCGCCT CGTATATGGG TACGGTCGTA GTGATTGA
|
|---|
| Protein sequence | MKRRWLFLFI IILTWVAVPK SAAAQTPTPF VIAADELYHG DIATFDQPVL VLGEVDGDIT
SWFGSITVRG IVRGDIVSYT GSIELESGAV VEGNILSLTG GVTIKSGVEA NGAVIGTEPL
VSSTVTTSLI NVLHGQTSNR LFLPVGISGI IGAIITILLT VALTLIWPRR TAGIGRALRA
APLRSALVGF LSTVLILAAL PFVVGLLTLT LIGPILFLPL SLLMHVPYAI GFTGVARALT
AAWPPTWTLR PPLAAAVGTL IIITPLVVVS MVAPAVALAI GYAVASWGVG AALISRGGAL
PIWQDRLVYG YGRSD
|
|---|
| |