Gene Cagg_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3814 
Symbol 
ID7266294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4653167 
End bp4654144 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content56% 
IMG OID643568626 
Productprotein of unknown function DUF324 
Protein accessionYP_002465086 
Protein GI219850653 
COG category[L] Replication, recombination and repair 
COG ID[COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.173062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.192987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTGGG ATTATTTTGT TTTTCTGGTT CAAAACACTG AACAAGAAAC TCTGGCGCGC 
CCTGAGGGGC TTTCGGGCGG CTTTGTGGAT GAGGTGTCGG TGCAGTTCTG CAAGGGGGAT
AATAAAGATA ATAAAGAAGA CGCTCGGAAT CGCTATATGC AACACGCAAG TGGGACTTTA
AACCTGATTT CGCAGACTTC ACAGGCTTCG CAGACTTCAC AGGCTTCGCA GACTTTGCAG
ATCAAGCCCA CCTTCACGTC CCTCCCTTCC GCCACCTGGC TCGCCTTCCA GGTCAATTTT
GAACTCCTCA CCCCCTGGTA CTCCAAAGAC GACCGGGTCT TTCACCTACT GGACAACCCG
GTGCGCAAGG ACCGGGTGTT TGGCGTGCCC TTCATGGCTG CCTCTTCCTG GAAGGGGATG
CTGCGCTGGG TCTGCCGGAT GCAGGCCGGA CTGCGCGAGC ACCTGGAAAA GCAAGGTGGA
AAAATGGACG ACTGGCGCGA CCCGGACTGG ATTCTGCATC TCTTTGGCAA CGAAAAAGGC
GAGGGTGAGG AGTTCAGCCG GGGCGCATTG GTTCTTTACC CCACCTGGTT CGACAAGATC
GGCTTTGAGG TGATCAACCC CCACAGTCGG GAGCGCCGCG CCGGTACCCA GCCCATCTAC
TATGAGGTGG TGCCGGGAAG ACGCCCGAAG GGAAATAACT CAGATAAATA TGAGAAAGGT
GGAAAAGGCA CGCTTTCCCT CCTCTACGCC CCCTGGCCGG GCATGAAGCC CGCAGCGAAT
CCCCAGGATG TGATTCCTAA ACTGCTGGAA GCCGTTGAAA AGCTCCTCAC CACCTACGGC
ATCTCCGCCA AGCGCACCGT CGGCTGGGGC ACGGCAAAGA TCACGGAGTG GCGTGCTTTC
CACAAAACGC ACGGAAGCAG CACGCAGAAG CAGAGTCGCA ATGATCTCTG GCAAGACATA
CAGAGCTGGT TATCTTGA
 
Protein sequence
MTWDYFVFLV QNTEQETLAR PEGLSGGFVD EVSVQFCKGD NKDNKEDARN RYMQHASGTL 
NLISQTSQAS QTSQASQTLQ IKPTFTSLPS ATWLAFQVNF ELLTPWYSKD DRVFHLLDNP
VRKDRVFGVP FMAASSWKGM LRWVCRMQAG LREHLEKQGG KMDDWRDPDW ILHLFGNEKG
EGEEFSRGAL VLYPTWFDKI GFEVINPHSR ERRAGTQPIY YEVVPGRRPK GNNSDKYEKG
GKGTLSLLYA PWPGMKPAAN PQDVIPKLLE AVEKLLTTYG ISAKRTVGWG TAKITEWRAF
HKTHGSSTQK QSRNDLWQDI QSWLS