| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3790 |
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| Symbol | |
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| ID | 7267864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 4625427 |
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| End bp | 4627328 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643568598 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002465062 |
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| Protein GI | 219850629 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase
[TIGR02316] propionate--CoA ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.20899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0016859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGGCTACG AAGCCGTCTA TCGCCGATCG ATTGAAGATC CCGAAGGCTA CTGGGCTGAG
TTCGCTGCCG AACTGCACTG GTTCAAACCG TGGGATAAGG TACTCGATAA CAGCAACCCA
CCGTTCACCC GTTGGTTTGT CGGTGGTGAG ACGAACCTCT GCTACAACGC AGTTGACCGT
CACGCCCTTG GCGGACGACG CGGACAAGCA GCTTTGATCT GGGAGAGTGC CGAGACCGGC
CAATCACGCA CCCTGACCTA TTTCGAGCTG TACCGCGAAG TGAATCGGCT TGCCGGTCTG
TTCCACAATC TCGGCGTGCG AAAGGGCGAC CGCGTGATCA TCTATATGCC GATGGTGCCC
GAAGCGATCT TTGCTATGTT GGCGTGTGTT CGCATTGGCG CCATCCACTC GGTAGTCTTC
GGCGGATTTT CGGTCACCTC ACTCGCCTCG CGAATCGATG ATGCCGAGCC GGTGTTGATC
GTCACTGCCG ATGCCGGGAT GCGCAAGGGC CAGCCGGTTC CGTTGAAAGA GATCGTGGAT
AAGGCGCTCA CAGAAGCCAA TACCGATAGC GTGCGCGACG TGCTTGTCCT CAACCGTGGC
ATCGTGCCGG TTGAACTGGT AAAGGGGCGC GATCTCGATT GGTACGAGCA GTTAGCTAAA
CGAGGTGAGC GATACGTTGA GCCGGCCCGT ATGCTCAGTA CCGACCCCTC GTATATCCTC
TACACCTCCG GTACGACCGG CAAGCCTAAA GGGGTAGTAC GCGACACCGG CGGCTATATG
GTGGCACTCT ACGCCAGCAT GAGTACCATC TATAACTGTG GTGACGGTGA CGTATTCTGG
AGTACCAGTG ACATCGGTTG GGTCGTCGGC CATTCGTATA TTGTCTATGC TCCTCTGCTG
AAAGGTGTGC CCACGGTCGT GTACGAGGGT CGCCCCGATC ATCCCGACCC CGGCGTCTGG
TGGCGGGTGA TCGAGAAGTA CGGTGTGACC CACGTCTTCA CTGCACCGAC AGCACTCCGC
GCGTTGCGTA AGTTCCCCGA GCAGTGGATG CGTGATGCCG ACATTAGCTC GCTGAAGATT
CTCTTCGCCG CCGGTGAACC ACTCGACGCA CCGACCTACG AGTGGGCCAC CCAAGCCCTC
GGTGTACCGG TAATCGACCA CTACTGGCAG ACCGAAAGCG GCTGGCCGAT GGTGACGAAC
CCGGTCGGTG TCGAGCTGTT GCCGATCAAA CCGGGGTCGC CGACGAAACC GGCCTTCGGC
CATCACCTCG AAGTGGTTGA CGCTGACGGC AACCGGGTGC CACCCGGCGA GAAGGGCTTT
CTCGTCGAGC ACGGCCCGTT GCCCCCCGGT ACATTGCTCA CGCTCTGGAA TGATGATGAT
CGGTTTGTGA AGGGATACTG GGGCTATTTC AAAGACAAAC TGCTCTACAT GACCGGCGAC
TACGCCATTC AAGATGAAGA CGGCTACCTG TTTATGCTGG GTCGCGCCGA CGAGGTGCTC
AACGTGAGCG GTCACCGCCT CGGCACCCGC GAGATCGAAG AGGTGGTCTC GGCCCACCCA
GCCGTGGCTG AAGCCAGCGT GATCGGCGTG CGCGATGAGC TGAAGGGCGA GGATGTGTTG
GTTGTGGCCG TGCTCAAACA GCATATCACG CCACAAATGC AAGACGACAT TGCCAACGAG
ATCCGCCAAC TGGTACGTGA GCGGATCGGT CCCATCGCAA CGCCGAAAGC CGTTCACTTT
GTCAGTATGC TTCCCAAGAC GCGGTCGGGC AAGATTATGC GCCGTGTGAT CCGGGCTGTC
TATCAGGGTG ACAACATTGG CGATCTCAGC ACCATCGAAG ACGATGCCAC CGTCGATATG
GTGCGCGAAG CAATTGCAAT GCTCCGCAGC GATCTCTTGT AA
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| Protein sequence | MGYEAVYRRS IEDPEGYWAE FAAELHWFKP WDKVLDNSNP PFTRWFVGGE TNLCYNAVDR
HALGGRRGQA ALIWESAETG QSRTLTYFEL YREVNRLAGL FHNLGVRKGD RVIIYMPMVP
EAIFAMLACV RIGAIHSVVF GGFSVTSLAS RIDDAEPVLI VTADAGMRKG QPVPLKEIVD
KALTEANTDS VRDVLVLNRG IVPVELVKGR DLDWYEQLAK RGERYVEPAR MLSTDPSYIL
YTSGTTGKPK GVVRDTGGYM VALYASMSTI YNCGDGDVFW STSDIGWVVG HSYIVYAPLL
KGVPTVVYEG RPDHPDPGVW WRVIEKYGVT HVFTAPTALR ALRKFPEQWM RDADISSLKI
LFAAGEPLDA PTYEWATQAL GVPVIDHYWQ TESGWPMVTN PVGVELLPIK PGSPTKPAFG
HHLEVVDADG NRVPPGEKGF LVEHGPLPPG TLLTLWNDDD RFVKGYWGYF KDKLLYMTGD
YAIQDEDGYL FMLGRADEVL NVSGHRLGTR EIEEVVSAHP AVAEASVIGV RDELKGEDVL
VVAVLKQHIT PQMQDDIANE IRQLVRERIG PIATPKAVHF VSMLPKTRSG KIMRRVIRAV
YQGDNIGDLS TIEDDATVDM VREAIAMLRS DLL
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