Gene Cagg_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3786 
Symbol 
ID7267860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4618757 
End bp4619917 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content50% 
IMG OID643568594 
Productprotein of unknown function UPF0118 
Protein accessionYP_002465058 
Protein GI219850625 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.262236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0203414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATG ACGCACGGCC GATCCGCTTT TCTTATCAAG CAAAATGGAT TACAAGCGCA 
ATTGTTGTTG GGTTAATAAT CGTTTTCTTG CACGAGATTA CGCATATTTT GCCGCCGTTC
ATCGGAGCAA TTATTACGGC GTATCTGTTT AACCCACTCA TCGGTTGGTT GCACCGGCGT
ACCGGCATTA GTCGGGCGAT CTGGATTGTG ATCTTGTATG TTGTGGCCGG TTCGGTGCTC
TATAGTCTAT TTACCGCTCT CTGGCCGCGC ATCGTGCAAC AGAGTCGCGA TTTGGCGGCG
AGTGCGCCGA TGATTATTCG TGAATTGACC ATCTGGTTTG AGCAGAATGA ATCGATTGTT
CTTGGCGATA TGGTGATTAG CCTTGCTCCG CTCGAGGCAC AGGTGATCGG GTTGATCAGC
GATGTTGCCG GTTGGTTGAG CGGGAATGTG CCCAAGATTG TCTTTTCGGC GCTCGAAAGT
GTGATTTATC TGTTGGTCTA TTTGATTATT ACATTTTATC TGTTGTTACA AGCACCACAG
TTGAAGGAAT GGGCACGGAA TCTCATCCCA TCACCCTACC GACGTGAAAT TGCTCATCTC
GGCTATCAAA TAGATCGCGT GTTTAATGCC TATATTCGAG GGCAATTAAT TCTCATCGTG
ATCATGTCGG TTCTGCTCTA TATTCCGCTC TCGATTTTGC AGGTACCATA CGCACTCGTG
ATCGCGATTG CCTCCGGTGT GCTCGAGATT TTACCGATTA TCGGGCCGTG GTCGGCAGCC
GGGATTGCGA TGACGGTGGC GTTGTTTCAG CCGGTGACAC CGTTCGGGCT GTCGAATGTC
TCATTGGTGA TTCTGCTCGG TGTTATTTAT TTCGTGTTAC GCCAGATCGA GGATCATTTT
ATTATTCCTA ATGTTATGGG GCCATTGGTG CGTTTGCATC CGGGTGTAGT TATCTTTGCC
ATTCTGGCCG GCGGTGCTTT GGCCGGTGCA TTTGGCCTCT TTATCTCGAT CCCAATCGCG
GCTGTCATTC GGATTATCCT CAGTTATCTC TATCGGAAGT TGACCGATCA GCCCGAACCA
CCGGCGAGCG CCGATCTTCC CAACCCACCT CCTCAGGGTG AGCCGGCGGT CGGTGAGGCT
GCGCTGAGTT CACAAGGATA A
 
Protein sequence
MEHDARPIRF SYQAKWITSA IVVGLIIVFL HEITHILPPF IGAIITAYLF NPLIGWLHRR 
TGISRAIWIV ILYVVAGSVL YSLFTALWPR IVQQSRDLAA SAPMIIRELT IWFEQNESIV
LGDMVISLAP LEAQVIGLIS DVAGWLSGNV PKIVFSALES VIYLLVYLII TFYLLLQAPQ
LKEWARNLIP SPYRREIAHL GYQIDRVFNA YIRGQLILIV IMSVLLYIPL SILQVPYALV
IAIASGVLEI LPIIGPWSAA GIAMTVALFQ PVTPFGLSNV SLVILLGVIY FVLRQIEDHF
IIPNVMGPLV RLHPGVVIFA ILAGGALAGA FGLFISIPIA AVIRIILSYL YRKLTDQPEP
PASADLPNPP PQGEPAVGEA ALSSQG