Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3786 |
Symbol | |
ID | 7267860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 4618757 |
End bp | 4619917 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643568594 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_002465058 |
Protein GI | 219850625 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.262236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0203414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATG ACGCACGGCC GATCCGCTTT TCTTATCAAG CAAAATGGAT TACAAGCGCA ATTGTTGTTG GGTTAATAAT CGTTTTCTTG CACGAGATTA CGCATATTTT GCCGCCGTTC ATCGGAGCAA TTATTACGGC GTATCTGTTT AACCCACTCA TCGGTTGGTT GCACCGGCGT ACCGGCATTA GTCGGGCGAT CTGGATTGTG ATCTTGTATG TTGTGGCCGG TTCGGTGCTC TATAGTCTAT TTACCGCTCT CTGGCCGCGC ATCGTGCAAC AGAGTCGCGA TTTGGCGGCG AGTGCGCCGA TGATTATTCG TGAATTGACC ATCTGGTTTG AGCAGAATGA ATCGATTGTT CTTGGCGATA TGGTGATTAG CCTTGCTCCG CTCGAGGCAC AGGTGATCGG GTTGATCAGC GATGTTGCCG GTTGGTTGAG CGGGAATGTG CCCAAGATTG TCTTTTCGGC GCTCGAAAGT GTGATTTATC TGTTGGTCTA TTTGATTATT ACATTTTATC TGTTGTTACA AGCACCACAG TTGAAGGAAT GGGCACGGAA TCTCATCCCA TCACCCTACC GACGTGAAAT TGCTCATCTC GGCTATCAAA TAGATCGCGT GTTTAATGCC TATATTCGAG GGCAATTAAT TCTCATCGTG ATCATGTCGG TTCTGCTCTA TATTCCGCTC TCGATTTTGC AGGTACCATA CGCACTCGTG ATCGCGATTG CCTCCGGTGT GCTCGAGATT TTACCGATTA TCGGGCCGTG GTCGGCAGCC GGGATTGCGA TGACGGTGGC GTTGTTTCAG CCGGTGACAC CGTTCGGGCT GTCGAATGTC TCATTGGTGA TTCTGCTCGG TGTTATTTAT TTCGTGTTAC GCCAGATCGA GGATCATTTT ATTATTCCTA ATGTTATGGG GCCATTGGTG CGTTTGCATC CGGGTGTAGT TATCTTTGCC ATTCTGGCCG GCGGTGCTTT GGCCGGTGCA TTTGGCCTCT TTATCTCGAT CCCAATCGCG GCTGTCATTC GGATTATCCT CAGTTATCTC TATCGGAAGT TGACCGATCA GCCCGAACCA CCGGCGAGCG CCGATCTTCC CAACCCACCT CCTCAGGGTG AGCCGGCGGT CGGTGAGGCT GCGCTGAGTT CACAAGGATA A
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Protein sequence | MEHDARPIRF SYQAKWITSA IVVGLIIVFL HEITHILPPF IGAIITAYLF NPLIGWLHRR TGISRAIWIV ILYVVAGSVL YSLFTALWPR IVQQSRDLAA SAPMIIRELT IWFEQNESIV LGDMVISLAP LEAQVIGLIS DVAGWLSGNV PKIVFSALES VIYLLVYLII TFYLLLQAPQ LKEWARNLIP SPYRREIAHL GYQIDRVFNA YIRGQLILIV IMSVLLYIPL SILQVPYALV IAIASGVLEI LPIIGPWSAA GIAMTVALFQ PVTPFGLSNV SLVILLGVIY FVLRQIEDHF IIPNVMGPLV RLHPGVVIFA ILAGGALAGA FGLFISIPIA AVIRIILSYL YRKLTDQPEP PASADLPNPP PQGEPAVGEA ALSSQG
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