| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3781 |
|---|
| Symbol | |
|---|
| ID | 7267855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4613759 |
|---|
| End bp | 4614682 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643568589 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002465053 |
|---|
| Protein GI | 219850620 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0933785 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.079613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATT ATCTGATTGC CGGCGCAGCG GGGTACATCG GCTCGCGTCT GGCAGCACGC
CTACTCGCTG CTGGCCATCA CGTGCGCGGT CTTGTCTATA GCGCTGAAGA CCCCGTGGTC
GAACGCCTCG CCTCTTTAGG CATGGCAGTC TGGATCGGCG ATCTTACCCG CCCTGAAACC
ATCGACGGCA TCACCGACGA GATTGAGGTT GTGTATAACC TCACCAACCG TATGCCAATC
GATGGCTCCA CTCTTCTCCG CTCCCTCTAC GTTGACGGGA ATCAACATTT GATTGCTATG
TCGGTGCGAG CCCGCACGGT ACGCGCGTAT GTGTGGGCAT CCAACGCAGC CCCTTACGGC
GATCATAGCG AAAATTGGGT TGATGAAGAT AGCCCAATCG CGCCGTCATA CCCGCTCGGC
ACAATCCTCG CAACTGCCGA GCAGATTATT CTGCAAGCGG TGCGAGCCTA TCGCTTCCCG
GCAATAATCC TGCGTATGGC CACCGTTTAC GGTCCTGACC GTGATCCACT AGAAGCGATT
GCCAGCGGCC AACTGACTAT TTACGGCAAC GGGCGTAATT TTATACCTCA TATTCACATT
GATGATGCAT TAGAGGTGTT GATCCGTACC GTCGAGATGG GGCAGATCGG TGCAATCTAC
AATGTTAGCG ATGATGAACC GCTACGCCTG ATCGAGATCG TGAGTGAAGT ACGTCGCCGG
CTCGGTATGC TACCACCACG CACGTTTGAC CCACAAGTGG GACTGCGGGC CGGTCTTGAT
CGCTCGGTGA TCGGGGCGCT CACTTCATCG GTACGAATGA ACAACGCGCG AATGCGTCAC
GACCTCGGTA TCGAACTTCG CTATCCGAGT CTACGGTACT GGATCGATGA GCGCTTACCG
CTCGAATTGG CCGTCGGTGT GTAG
|
|---|
| Protein sequence | MTNYLIAGAA GYIGSRLAAR LLAAGHHVRG LVYSAEDPVV ERLASLGMAV WIGDLTRPET
IDGITDEIEV VYNLTNRMPI DGSTLLRSLY VDGNQHLIAM SVRARTVRAY VWASNAAPYG
DHSENWVDED SPIAPSYPLG TILATAEQII LQAVRAYRFP AIILRMATVY GPDRDPLEAI
ASGQLTIYGN GRNFIPHIHI DDALEVLIRT VEMGQIGAIY NVSDDEPLRL IEIVSEVRRR
LGMLPPRTFD PQVGLRAGLD RSVIGALTSS VRMNNARMRH DLGIELRYPS LRYWIDERLP
LELAVGV
|
|---|
| |