Gene Cagg_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3778 
Symbol 
ID7267852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4610880 
End bp4611716 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID643568586 
Producthypothetical protein 
Protein accessionYP_002465050 
Protein GI219850617 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0110006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0388947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CGACTAATCA ATCGGCCCCT CCACTCTACA TTGTTTCCGG CGGCGCCGGC 
GCCGTTGGCG AACAAGTCGC GCGCCTAACT CTCTCACAGT TTGAAGGCGC CGAAGTCCCA
CTTATCATTG TGCCTAATGT GCGCGATCCC GAACAGATCG CTGAAGTCGT TGCGCAGGCC
GCCCAGCAAA ACGGCACCAT TTTGCATACG CTCATGGAGC CAACCTTGCG CCGTGAGCTG
ATGCGCCTCG CTCGCGAGAT GGGCGTTGCC GAGATCGATC TCGTCGGGAG TGTCCTATCA
CGATTGGCAA CCGTCCTCCA AAAAGAGCCG CTGGGAAAAC CCGGCTTATA TCAAGCCCGT
CGTTCAACCT ATTTTGCCCG GTTGGAGGCA ATCGAGTATA CCGTTGCGCA CGACGATGGC
AACAAACCCT ACGAGCTGCA TCAGGCTGAT ATTGTCCTGG TGGGTATTTC GCGGGTAGGT
AAAACTCCAC TGAGCATGTA TTTGGCCGTC CTCGGTTGGA AGGTGGCGAA TGTACCGCTG
GTGCGTGAAA TCCCATTGCC CGAAGCCCTG TTACAGGTCG ATCCGCGTCG GGTCATCGGT
CTGATCGTCG AAGCGGAGCA AATCGCCGCC CGCCGCCGCT GGCGGCAACG CCGGATGGGT
GTCAACCTGG GTAGCACGTA CACCAACCTT GAAGCGGCAA TTGATGAAGT GGAATGGGCA
CGTCGCATCT TCCGCCAGCA TGGCTGGACT ACACTTAACG TGACCGATAA ATCGATCGAG
GAGAGCGCTG ACGAAATTAT TTCCCTGATC TCGCGGCGAT TTAACCCAAC GGGATAA
 
Protein sequence
MSEPTNQSAP PLYIVSGGAG AVGEQVARLT LSQFEGAEVP LIIVPNVRDP EQIAEVVAQA 
AQQNGTILHT LMEPTLRREL MRLAREMGVA EIDLVGSVLS RLATVLQKEP LGKPGLYQAR
RSTYFARLEA IEYTVAHDDG NKPYELHQAD IVLVGISRVG KTPLSMYLAV LGWKVANVPL
VREIPLPEAL LQVDPRRVIG LIVEAEQIAA RRRWRQRRMG VNLGSTYTNL EAAIDEVEWA
RRIFRQHGWT TLNVTDKSIE ESADEIISLI SRRFNPTG