Gene Cagg_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3770 
Symbol 
ID7267843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4596894 
End bp4597652 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID643568577 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_002465042 
Protein GI219850609 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC GTGTTGCCCT AATTACCGGT GCAGCCAGCG GTATCGGCTT GGCCTGCGCC 
GAACGATTTG CCGCCGACGG CTACCGGGTG GTGCTGGTCG ATCTCCCCGG CTCTGCCGGT
GAAGCGGTTG CCGAACGGCT CGGCGGCATC TTTGTTGGCG TTGATTTAGC AACGCAGGCC
GGTTGCCGGC AAGCAGTTGA TGCCGCGCTC AGTGCCTATG GCCGCGTCGA TGCCTTGATC
AACAATGCCG GCTTTCAACA CATTGACCCC ATCGAGGACT TTCCTGAAGA TCGTTGGGAA
ACGATGATCG CGGTGATGCT GACTGCACCA TTTCGTTTGA CCAAGTATGT CTGGCCGAGC
ATGAAAGCCA ACGGTCGTGG TCGGATTGTC AATATCGGAT CGGTGCATAG TCTACGGGCA
TCGCCGTTTA AGAGTGCCTA TATCTCGGCC AAACACGGCT TGCTTGGGCT TACCCGCACT
ACCGCTCTCG AAGGAGGTCC TTACGGAATT ACCGTCAATC TGATCGCACC GGCCTATGTG
CGCACACCGT TGGTTGAAAA GCAAATCGCC GATCAGGCCC GTACTCGTGG TATTCCTGAA
GATCAGGTCA TCGAGAAGGT GATGCTCGAA CCGGCAGCGA TCAAGCGCCT CATTGAACCA
TCGGAAGTGG CCGGCTTAGC AGCTTTTCTC TGCTCCGACG CTGCCGGTGC CATTACCGGC
TCGGTGTACG AAATTGCTTT AGGTTGGACG GCACGGTAG
 
Protein sequence
MSERVALITG AASGIGLACA ERFAADGYRV VLVDLPGSAG EAVAERLGGI FVGVDLATQA 
GCRQAVDAAL SAYGRVDALI NNAGFQHIDP IEDFPEDRWE TMIAVMLTAP FRLTKYVWPS
MKANGRGRIV NIGSVHSLRA SPFKSAYISA KHGLLGLTRT TALEGGPYGI TVNLIAPAYV
RTPLVEKQIA DQARTRGIPE DQVIEKVMLE PAAIKRLIEP SEVAGLAAFL CSDAAGAITG
SVYEIALGWT AR