| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3761 |
|---|
| Symbol | |
|---|
| ID | 7267834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4585003 |
|---|
| End bp | 4587144 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643568568 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_002465033 |
|---|
| Protein GI | 219850600 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.442402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGA CTCTTCTTAC ACTGATAGCG CTCCTCGCGC TACTCCTGCC GGTACTGACC
GCGTGTGGTC AGCCTGCGGC CCAACCGACA GCGACACCGG CTCCTACAGC CGCACCAACC
GCCGCTCCAA CTACTGCTCC AACAGATTCC AGCAAGCCCC GGATCGCACT GGTGACCGAT
CTGGGCAAGG TCAACGATGG AACGTTTAAC GAGTTTGCCC ACCTCGGTGC GTTGCGGGCG
GCACAAGAGT TTGGGCTGGA GTACAAGTAC ATCGAGACGC AGGCACAAGC CGACTACGAG
AAGAACATTC AAACCTTCGT CGATGAGGGT TTCGATGTGA TCATCACCGT CGGTTTCCTC
ATCGCCGACG CTACCAAGAA GTTCGCCGCC GAGCACCCTG ACATCATCTT TATCGGCGTC
GACCAGTTCT ACGAGCCGGG CACGGTGACC GACAATTTGG TCGGGTTGCA GTTCCGTGAG
GATCAGGCCG GCTTCTTGGC CGGTGCCCTG GCCGGTATGA TGACCAAGAC TAACACCATC
GGTATAGTTG CCGGTCAAGA GATCCCACCG GTGAAGCGCT TCAAGAATGG CTTTGATAAC
GGCGCACGCT ATGTCAATCC CAATATCAAC CTGCTCGGTG TCTATCTGCC TACCTTCATC
GACCCCGCCC TCGGTGCGAG CACGGCCCAG CAGATGATCG GTGAGGGTGC AGACGTGATC
TTCGGTGCGG GCGGTCCCAC CGGCTCCGGC GCGATCAAAG AAGCGGCGGC GCGCGGTGTG
TTCGTCATCG GGGTTGACCA AGACGAGTAT GTTACTACCT TTGCCAACGG CTCGGCACCC
GGCGCCGATA AAATTCTGTC GTCGGCGATC AAGCGGGTTG ATGTCGCCGT CTACGACCAG
GTCAAGGCAG TCGTGAACGG TACCTTCAAA GGTAACGGCA TCGCGCTGTA CGAGGCGGCG
AACGGTGGTA TCGGCTACGC CGATTATCAC GACACTGCTA ACATCGTGCC GCCTGAAGTT
AAGGCTCGAA TGGAGCAGAT CCTCGCCGAA CTGACCAACG GTACCCTGAC GACCGGTGTC
GATCCGGTCA GCGGTGATGT CGATCCGGCG ACCATCCCGG CACCGAAGCC GTTCCGCGCC
TCAGATGTCA AGCTACCCCG GATCGCACTG GTGACCGATC TGGGTAAAGT CAACGATGGA
ACCTTTAATC AGTCGGCTCA CCTCGGCGCA TTGCGGGCGG CGCAAGAGTT TGGGCTGGAG
TACAAGTACA TCGAGACGCA GGCACAAGCC GACTACGAGA AGAACATTCA AACTTTCATT
GATGAGGGCT TTGATGTGAT CATCACCGTC GGTTTCCTCA TCGCCGACGC TACCAAGAAG
TTCGCCGCCG AACACCCTGA CATTATCTTC ATCGGCGTCG ACCAGTTCTA CGAGCCGGGC
ACGGTGACCG ACAATTTGGT CGGGTTGCAG TTCCGTGAGG ATCAGGCCGG CTTTTTGGTT
GGCGCGCTGG CCGGTATGAT GACCAAGACC AACACCGTCG GTGTCGTGGC CGGACAAGAG
ATCCCGCCCG TGAAGCGTTT TAAGAATGCC TTTGATAACG GCGCTCGCTA TGTCAACCCC
AATATCAACC TGCTCGGTGT CTATCTGCCT ACCTTCATCG ACCCCGCCCT CGGTGCGAGC
ACGGCCCAGC AGATGATCGG TGAGGGTGCA GACGTCATTA TGGGTGCCGG TGGACCTACC
GGCTCCGGTG CGATCAAAGA GGCCGCCGCC CGCGGTGTCT ATGTGATCGG CGTCGACCAA
GATGAGTACT TTACGACGTT CGCCGGTGGT ACAGCTCCCG GTGCTGATCG GCTGCTAACC
TCGGCATTGA AGCGGGTCGA TGTCGCCGTC TACGACCAAG TCAAGGCGGT CGTGAACGGT
ACTTTCAAGG GCAACGGCAT CGCGATGTAC GAAGCAGCGA ACGGTGGTAT CGGTTACGCC
GACTATCACG ACACCGCCGA TGATGTACCC GATGCGGTCA AGCGCCGGAT GGAGGAGATT
CTTGCCGCCC TGACCAAGGG TGAATTGACA ACCGGCGTCG ATCCGGTCAG CGGTGATATT
GATCCGGCGA CCATCCCGGC ACCGAAGCCG TTCCAACCCT AA
|
|---|
| Protein sequence | MRKTLLTLIA LLALLLPVLT ACGQPAAQPT ATPAPTAAPT AAPTTAPTDS SKPRIALVTD
LGKVNDGTFN EFAHLGALRA AQEFGLEYKY IETQAQADYE KNIQTFVDEG FDVIITVGFL
IADATKKFAA EHPDIIFIGV DQFYEPGTVT DNLVGLQFRE DQAGFLAGAL AGMMTKTNTI
GIVAGQEIPP VKRFKNGFDN GARYVNPNIN LLGVYLPTFI DPALGASTAQ QMIGEGADVI
FGAGGPTGSG AIKEAAARGV FVIGVDQDEY VTTFANGSAP GADKILSSAI KRVDVAVYDQ
VKAVVNGTFK GNGIALYEAA NGGIGYADYH DTANIVPPEV KARMEQILAE LTNGTLTTGV
DPVSGDVDPA TIPAPKPFRA SDVKLPRIAL VTDLGKVNDG TFNQSAHLGA LRAAQEFGLE
YKYIETQAQA DYEKNIQTFI DEGFDVIITV GFLIADATKK FAAEHPDIIF IGVDQFYEPG
TVTDNLVGLQ FREDQAGFLV GALAGMMTKT NTVGVVAGQE IPPVKRFKNA FDNGARYVNP
NINLLGVYLP TFIDPALGAS TAQQMIGEGA DVIMGAGGPT GSGAIKEAAA RGVYVIGVDQ
DEYFTTFAGG TAPGADRLLT SALKRVDVAV YDQVKAVVNG TFKGNGIAMY EAANGGIGYA
DYHDTADDVP DAVKRRMEEI LAALTKGELT TGVDPVSGDI DPATIPAPKP FQP
|
|---|
| |