Gene Cagg_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3743 
Symbol 
ID7267816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4563192 
End bp4563839 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID643568550 
ProductSNARE associated Golgi protein 
Protein accessionYP_002465015 
Protein GI219850582 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.362202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.890971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTA TTCTCGAACA ACTCGGTCTT TGGATAGAAA GCATCATTCT TGCCATTGGC 
TACCCCGGCA TCACGCTGGT CATGTTGGCC GAAAATCTCT TTCCGCCAAT CCCGTCTGAG
TTGGTGATGC CGTTTGCCGG CTTTCTCGTT GGGCGGGGTG AGATGAACCT GTTTCTGGCA
ATTGGTGCCG GAACGCTCGG TTCGGTGCTC GGCGCAATTG TACTCTATTA TATCGGTATG
CTGGCCGGTG AGCCATTGGT TCGTCCTTTC TTCCGTCACT ATGGTCGTTT TTTTCTCCTC
TCTGAGCAAG ACCTCGATAA AGCACTAAAT GCTTTTACCA CCTACGGTGA TGTGATCGTG
CTTGGAGGCC GTGTGATTCC GATCATTCGC AGCCTCATCT CGTTGCCTGC CGGAATGAAT
CGCATGCCCA TGGGGCGCTT TTTGATCTTT ACAACTCTTG GTTCAGCCGT TTGGACATCA
TTATTGACAA TTGGTGGCGT CATCCTTGGG GCAAACTGGG AGTTTGTGAT CGAAATAGTC
GATCAGTACC AGAAGCTGGT ATTGGTGGTA TTGACAATGG GAGCGGTGGT CTTTGTGGTG
CAGCGATTAC GCAGCTTGCG CCGAGTTGCA CTGAGCCGTA GCGAATGA
 
Protein sequence
MGRILEQLGL WIESIILAIG YPGITLVMLA ENLFPPIPSE LVMPFAGFLV GRGEMNLFLA 
IGAGTLGSVL GAIVLYYIGM LAGEPLVRPF FRHYGRFFLL SEQDLDKALN AFTTYGDVIV
LGGRVIPIIR SLISLPAGMN RMPMGRFLIF TTLGSAVWTS LLTIGGVILG ANWEFVIEIV
DQYQKLVLVV LTMGAVVFVV QRLRSLRRVA LSRSE