Gene Cagg_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3726 
Symbol 
ID7268262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand- 
Start bp4537932 
End bp4538957 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content55% 
IMG OID643568533 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002464998 
Protein GI219850565 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.00924113 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTCGCG TCGCAATTAA CGGTTTCGGC CGGATCGGGC GCCAGAGCTT TAAGGCGATG 
CTGGAGTATT ACCCAGACGA GTTCGAGATC GTGGCAATTA ACGACCTGAC CGACGCGCAT 
ACGTTAGCAC ATCTACTCCG CTATGACTCG ACCTACGGCG CGTTTGAAGG TGAAGTGACC 
GTAACCGAGA AGTCCATTAT CGTCGAGCAA GACGATGTGC GCTACGAATT ACTAACCCTA 
GCTGAGCGTG ATCCTGCCGC ACTGCCGTGG AAAGAACTGG GCGTTGACAT TGTGATCGAG 
TCGACCGGCC GTTTTACCGA TGCCGAAAAG GCCAAAGCTC ACCTCGCCGC AGGTGCCAAG 
AAAGTGATCA TTACGGCACC GGCCAAGGGC GAAGACATCA CCATCTGTCT GGGTGTGAAT 
GACGCCAAGT ACGATCATGA GAAGCACCAT ATCATCTCGA ATGCCTCCTG CACCACCAAC 
TGTCTGGCGC CGGTGGCCAA AGTACTCAAC GATCGCTTCG GGATCGAACG CGGCTTGATG 
ACGACGATCC ACTCGTACAC AATGGATCAG AACTTGCAGG ATAACGTCCA CAAGGATCTG 
CGCCGCGCCC GCGCAGCCGC GATCAATATG GTACCTACCA CTACCGGCGC TGCAAAGGCT 
GTCGCGCTGG TTATTCCTGA ATTGAAGGGT AAGTTCCACG GCTACGCGGT GCGTGTCCCG 
ACACCAACCG TCTCAATGGT TGACTTCTCG GTTCTCCTCA GCACCAAGAC GTCGGTCGAA 
GAGATCAATC AGGCGTTCAT TGAGGCTAGC GAGAGCGAAG AGCTTGAGGG TATCCTCGGT 
GTCAGCCACG AGCCGCTGGT CAGCACCGAT TTCATCGGTA CTACGTACAG CAGTGTGGTT 
GACCTACCCC TGACGATGAG TATGGGCGAT GATTTCTTCA AGATCGTCGC GTGGTACGAT 
AACGAGTGGG GTTATTCAGT ACGTGTCGCC GATCTAACGG CGCTGGTTGC AGATCGGTTT 
GAGTAG
 
Protein sequence
MVRVAINGFG RIGRQSFKAM LEYYPDEFEI VAINDLTDAH TLAHLLRYDS TYGAFEGEVT 
VTEKSIIVEQ DDVRYELLTL AERDPAALPW KELGVDIVIE STGRFTDAEK AKAHLAAGAK 
KVIITAPAKG EDITICLGVN DAKYDHEKHH IISNASCTTN CLAPVAKVLN DRFGIERGLM 
TTIHSYTMDQ NLQDNVHKDL RRARAAAINM VPTTTGAAKA VALVIPELKG KFHGYAVRVP 
TPTVSMVDFS VLLSTKTSVE EINQAFIEAS ESEELEGILG VSHEPLVSTD FIGTTYSSVV 
DLPLTMSMGD DFFKIVAWYD NEWGYSVRVA DLTALVADRF E