Gene Cagg_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3715 
Symbol 
ID7268251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4514707 
End bp4515696 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content57% 
IMG OID643568522 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002464987 
Protein GI219850554 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000372976 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGATG TCGCCCGGCT GGCTGGCGTG TCGCAGACCA CGGTCTCGTT TGTGGTCAAT 
AACGTCACCA GCGCCGCCAT CAGCCAAGAG ACGCGCGATC GAGTCTGGGC TGCGATCCAT
GCGCTCGGAT GGCGTCCCAA CGCAATTGCG CGCGGTTTGC GTACTCGCCA CTCACAAACC
CTCGGTTTGA TCTCTGATGA GGTGGTAACG TCACCTTATG CAGTACGGAT GATCCTTGGG
GCACAAGAGG CGGCGTGGTC GGTCCGGCAG ATGCTCCTGG TGGTCAATAC GAGTGGTCAG
CAAGATATTG AGCAAATGGC GTTGCAGTTT ATGCTCGAAC GGCGGGTAGA AGGGTTAATC
TATGCGACCA TGTACCACCA CGAGGTGGTA CCCCCACCCG ATCTAGGCCC GGTACCGATG
GTGCTGGTGA ACTGCTTTGT AGCCGATCGC TCACTGCCGG CGCTGATCCC CGATGAGGTA
CAGGGTGGCT ATACCGCGAC CGAGGCACTG ATTCGCCGCG GTCATCGTCG GATTGCGTTT
ATTAATGAGG TCATCCCAAT GCCGGCGCTC TTTGGCCGGC TAGAAGGGTA TCGGCGAGCG
CTGGCCGATT ATGGTTTACC GTTTGACCCA ACCTTGGTGT GCAGTGTGCA TTCGAATGCA
CAGGAAGCCT TTGCTGCAAC CCGCGCTTTG CTCGAATTAG CTGAACGTCC GACGGCTATC
TTCTGTTTTA ACGATAAGAT GGCAATGGGA GCTTATGACG CGATCAAGCG TTTGGGATTA
CGCATTCCAC ACGATGTAGC CGTAGTGGGG TTCGATAATC TTGAGCTGAT CGCTGCTCAG
CTTTACCCGC CGCTGACTAC CGTCGAGCTA CCCCATTACG AAATGGGGCG GCGGGCGGTA
GAGATGCTAC AAACCTTGCC GGCAGGTGAG ACGTTGCCAC CGATCCAGCA CTATATCCCC
TGTCCATTAA TTGAACGGGC GTCGATCTAG
 
Protein sequence
MYDVARLAGV SQTTVSFVVN NVTSAAISQE TRDRVWAAIH ALGWRPNAIA RGLRTRHSQT 
LGLISDEVVT SPYAVRMILG AQEAAWSVRQ MLLVVNTSGQ QDIEQMALQF MLERRVEGLI
YATMYHHEVV PPPDLGPVPM VLVNCFVADR SLPALIPDEV QGGYTATEAL IRRGHRRIAF
INEVIPMPAL FGRLEGYRRA LADYGLPFDP TLVCSVHSNA QEAFAATRAL LELAERPTAI
FCFNDKMAMG AYDAIKRLGL RIPHDVAVVG FDNLELIAAQ LYPPLTTVEL PHYEMGRRAV
EMLQTLPAGE TLPPIQHYIP CPLIERASI