Gene Cagg_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3678 
Symbol 
ID7268213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4470887 
End bp4471894 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID643568484 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002464950 
Protein GI219850517 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0665341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC GGGTTGGGAT CAACGGCTTT GGCCGGATCG GACGGTTGGC GCTCCGGGCC 
GCGTGGGGCT GGCCAGAACT TGAGTTTGTC CACATCAACG AGATCGGTGG CGATACGGCG
GTAGCGGCGC ATTTGCTCAC CTTTGACTCG GTGCATGGGC GTTGGCCGCC CGAGGTACAC
GGTGAGGGTG ATCGGTTGGT TATCGACGGT CATGCGATTG GCTATAGCCA GATCAAAGAC
CCCGCGGCGG TGCCGTGGGC AGCCGCCGGG GTTGAGATCG TGCTGGAGGC GACGGGGAAG
TTTCGCACCA CTGAGCAGTT GGCGGCCTAT TTTGCCGCTG GCGTCAAGAA GGTGATTGTG
GCGGCACCGG TGAAGGGCGA GGCGCTGAAT GTGGTGATGG GCGTGAACGA TCATTGGTAC
GATCCGGCCC GCCACCATCT GCTGACGGCG GCTTCGTGTA CGACCAATTG TTTGGCGCCG
ATTGTAAAGG TGATCCACGA GGGGATCGGT ATCCGCCACG GCATGATCAC CACCATCCAT
AGCTCGACCA ACACCCAGAG CGTACATGAC CAACCGTACA AAGATTTGCG GCGGGCGCGG
GCATCGAGCT TGTCGCTGAT ACCTACAACC ACCGGTTCGG CAACGGCGAT TGGTCTTATC
TTCCCAGAAT TGCAAGGAAA GCTCGATGGG CAAGCGGTGC GGGTACCGCT ACTCAACGCT
TCGCTGACCG ACTGTGTGCT TGAAGTCACA CGACCAACCA CCGTCACCGA AGTGAATGAC
TTGCTGCGCA CCGCCGCCGA AGGCTCGCTG AAGGGCATTT TGGCCTACGA GACGCGCCCG
CTGGTGTCGA TCGATTTTGT CACCGATCCC CATTCGGCAA TTGTCGATTC GCTGTGTACG
ATGGTGACTA ACGGCACACA GGTGAAGATT TATGCGTGGT ACGACAACGA GTGGGGGTAC
GCCAACCGGT ATGTGGAATT AGCACGAAAG GTGGCAATGG CGCTATGA
 
Protein sequence
MAVRVGINGF GRIGRLALRA AWGWPELEFV HINEIGGDTA VAAHLLTFDS VHGRWPPEVH 
GEGDRLVIDG HAIGYSQIKD PAAVPWAAAG VEIVLEATGK FRTTEQLAAY FAAGVKKVIV
AAPVKGEALN VVMGVNDHWY DPARHHLLTA ASCTTNCLAP IVKVIHEGIG IRHGMITTIH
SSTNTQSVHD QPYKDLRRAR ASSLSLIPTT TGSATAIGLI FPELQGKLDG QAVRVPLLNA
SLTDCVLEVT RPTTVTEVND LLRTAAEGSL KGILAYETRP LVSIDFVTDP HSAIVDSLCT
MVTNGTQVKI YAWYDNEWGY ANRYVELARK VAMAL