| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3660 |
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| Symbol | |
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| ID | 7268195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 4450066 |
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| End bp | 4452111 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643568466 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_002464932 |
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| Protein GI | 219850499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0589668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA TCGACGTGAC CCAACGCATC AATGAGTTGC GGACGCTTAT CCGTCGCTAT
GATTACCACT ACTACGTCCT CGACGATCCC ATTGTGAGCG ACGCCGAATA CGATGCCTTA
ATGAACGAAC TACGCGCACT AGAAGCGGCG CATCCAGAAT TGATCACCCC CGACTCACCA
ACCCAGCGGG TCAGCGGCAC ACCGGCCAGT CAGTTTGCGA AAGTGCAACA TCCTCAGCCG
ATGCTCTCGC TTGGCAATGC TTTCACCACG ACCGATCTGC TTGCCTGGCG TGATCGAGTG
CTGCGCTTAC TCGGTCAGGA TACAGCGGTA GCCTATGTGG TCGAACCCAA GATCGACGGG
CTGGCAGTAG CATTGACATA CCATGACGGC CAATTCGTGC AAGGTGCAAC GCGCGGTGAT
GGTGAGGTAG GTGAAGATGT AACCGCGAAT CTGCGCACGA TTAGTAGCAT TCCGCTGCTG
TTGCACCCAC CAGATGGCGG CCACGACCGA GATGTACCCA CCGCGTTACC CTCACTGATC
GAGGTGCGCG GTGAAGTCTA TATGCGTACC GCTGACTTCG AGGCACTGAA TGATCGTCTG
GCCGCTGCCG GTGAGAAGAT CTTCGCCAAC CCACGCAATG CCGCTGCCGG TTCACTTCGC
CAAAAGGATC CGGCTATTAC TGCTGCTCGA CCGCTGCGCT TTTTTGCCTA CGGTGTCGGT
CCGGTCGAAG GAGTCGAGCT GACCGGTCAA TGGCAGACGT TACGGTATCT ACGGATGCTA
GGCTTTCCGG TCAATCAAGA TGTCCGTCGT TTTACCGATT TCGATGAGGT ACTGGCCTAC
TGTGAACAAT GGATGGCCCG TCGCGATGAA TTAACCTACG AAGCTGATGG GATGGTCATC
AAGATTGACG ATTTTGCCCA GCAGCGTGAG CTTGGCGTGG TTGGGCGCGA TCCACGCTGG
GCTATTGCCT TTAAATTTCC ACCGCGCGAG GCTATCACTC GTTTACTCAA TATTACGGTG
AATGTTGGAC GGACCGGCGT CGTTACGCCA AATGCCGAGT TAGAGCCGGT ACAGATCGGT
GGAGTCATTG TGCGTAATGC GAGCCTGCAT AACGCCGACT ATATCGCTCA GCGTGATATT
CGGATCGGCG ATTACGTCAT TGTGAAACGG GCCGGTGACG TGATTCCGTA TGTCGTTGGG
CCGGTCGTGG CCAGGCGTGA TGGCAGCGAG CGACCGTGGC AGTTTCCGAC TCATTGTCCG
GCATGCGGTT CACCACTTGA ACGCGAACCG GGTGAGGCGG CCTGGCGTTG TAACAATTTT
GGGATTTGTC CGGCGCAGTT GGTTCGTCGG CTAGAACACT TTGCCAGCCG TGCTGCACTC
GATATTGTTG GCCTGGGTGA ACGACAGGCC GAGTTGTTTG TGCAACGTGG TTTGGTGCGT
GATGTAGCCG ATTTGTTCTA CCTGAAAGCA GAGGATTTTG CCGGATTAGA AGGGTTTGGC
CCGAAGCGGA TCGCGAACTT GCTGAACGCC ATTGACGCTG CGCGCCAACG ACCACTCGAC
CGCTTGATCG TTGGTTTGGG GATTCGCTAT GTCGGCTCCG TGGCAGCCCA GGCATTGGTC
AACTCCTTAG GATCGCTCGA CGCGATTATG AATGCTCGCC AAGAAGAACT CGAGCAGATT
CCCGGAATTG GGCCGGTGGT TGCGGCAAGC ATTGTTGATT TCTTTGCCCA CCCCGAAAAT
CGGCAGTTGA TCGAAAAGTT GCGCGCGGCA GGAGTTCAGA TGAACGCCGG CCCCCAGCGT
GAACGGAAGA GTGATGTGCT CGCCGGACAG ACGTTTGTCC TCACCGGAAC GTTACCTTCA
CTGACCCGCG AGCAGGCCAG CGCTCTGATC ATCGCACACG GCGGTAAAGT CACCGATAGC
GTCAGTAAGA AGACGAATTA TGTCGTAGCG GGGGTGAATG CCGGTAGCAA ATTAGCGAAG
GCCCAGCAAC TTGGTATTCC GGTGCTTGAT GAAGCCGCGC TGTTGGCGCT GATCGGTGAG
CGGTGA
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| Protein sequence | MNHIDVTQRI NELRTLIRRY DYHYYVLDDP IVSDAEYDAL MNELRALEAA HPELITPDSP
TQRVSGTPAS QFAKVQHPQP MLSLGNAFTT TDLLAWRDRV LRLLGQDTAV AYVVEPKIDG
LAVALTYHDG QFVQGATRGD GEVGEDVTAN LRTISSIPLL LHPPDGGHDR DVPTALPSLI
EVRGEVYMRT ADFEALNDRL AAAGEKIFAN PRNAAAGSLR QKDPAITAAR PLRFFAYGVG
PVEGVELTGQ WQTLRYLRML GFPVNQDVRR FTDFDEVLAY CEQWMARRDE LTYEADGMVI
KIDDFAQQRE LGVVGRDPRW AIAFKFPPRE AITRLLNITV NVGRTGVVTP NAELEPVQIG
GVIVRNASLH NADYIAQRDI RIGDYVIVKR AGDVIPYVVG PVVARRDGSE RPWQFPTHCP
ACGSPLEREP GEAAWRCNNF GICPAQLVRR LEHFASRAAL DIVGLGERQA ELFVQRGLVR
DVADLFYLKA EDFAGLEGFG PKRIANLLNA IDAARQRPLD RLIVGLGIRY VGSVAAQALV
NSLGSLDAIM NARQEELEQI PGIGPVVAAS IVDFFAHPEN RQLIEKLRAA GVQMNAGPQR
ERKSDVLAGQ TFVLTGTLPS LTREQASALI IAHGGKVTDS VSKKTNYVVA GVNAGSKLAK
AQQLGIPVLD EAALLALIGE R
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