Gene Cagg_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3571 
Symbol 
ID7269714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4335646 
End bp4336314 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content56% 
IMG OID643568378 
Productprotein of unknown function DUF820 
Protein accessionYP_002464845 
Protein GI219850412 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.195938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.125466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCC AGGTCGCTGC TTCCGTGCCG ATCGTCTACC CAGAAAGTGA CGGCATGCCG 
ATGGCGGACA ACACTAAGCA GTTTCACGCA ATCGTCACCA TTCAGGGGAA TCTCGATGCG
ATCTTTCGTG AACGGGCTGA TGTCTTCGTT GCCGGCGATC TGCTATGGTA TCCGGTCGAA
GGTCGCCCTG ATATTCGCCG CGCACCTGAT GTGATGGTCG TTTTCGGGCG ACCAAAGGGT
GACCGTGGCT CATACCGTCA GTGGGAAGAG GATAACATTG CGCCGCAGGT GGTGTTTGAG
GTGTTGTCAC CGAACAACAC ATTGACCGAA ATGGCGGCGA AGTTGGAATT TTACGATATG
TACGGTGTCG AAGAGTATTA TCTGTACGAC CCAGATACCG GCGATATGAG CGGCTGGCAG
CGACGTGAGG GTCGCTTGAG GGTTATTCCT GAACTTGATG GCTGGAATAG CCCGCGTTTA
GGTATTACGT TTCGTCGCAC TCCTGATGGT TTTCGCATGT ACTGGCCGGA TGGTCGCCCG
TTTCTGAGTT TTGTTGAGCT ACAGGCGCAG GCCGAGCAAG AGCGGCAACG AGCCGAGCAA
GAGCGGCAAC GGGCTGAGCG CTTGGCTGCC CGTTTACGTG AGCTGGGCAT AAACCCCGAC
GAGGTTTGA
 
Protein sequence
MTSQVAASVP IVYPESDGMP MADNTKQFHA IVTIQGNLDA IFRERADVFV AGDLLWYPVE 
GRPDIRRAPD VMVVFGRPKG DRGSYRQWEE DNIAPQVVFE VLSPNNTLTE MAAKLEFYDM
YGVEEYYLYD PDTGDMSGWQ RREGRLRVIP ELDGWNSPRL GITFRRTPDG FRMYWPDGRP
FLSFVELQAQ AEQERQRAEQ ERQRAERLAA RLRELGINPD EV