Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3569 |
Symbol | |
ID | 7269712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 4333617 |
End bp | 4334498 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643568376 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002464843 |
Protein GI | 219850410 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.687406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCG ATTTAGCGGG GTTTGTGATT ATCGATAAGC CGGCCGGACT CACTTCACAC GACGTTGTGG CCCACGTGCG ACGATTGGTC GGACGGGTAG TGAAGGTAGG CCACGCCGGT ACGCTCGACC CAATGGCGAC GGGGGTGTTG CCGGTAGCTT TGGGGAGCGC GACTCGGCTG CTCGACCAGT TGGTTGATAC CCGAAAAGGT TATCTCGGCG TGGTGCGGTT AGGTATCCAG ACGACGACTG ACGATGCCGA TGGTGAACCG CTGGTGACGC AGGCGGTTCC CGAACTCACG CCGGAGACTA TCGAGACGGT ATTAACCCGC TTTCGCGGTG ATATTCTGCA ACAACCACCG GCTTTCTCGG CACTTCACAT TGATGGTCAA CGCGCGTATG CGTTAGCTCG CGCCGGCAAC GAAGTAACGT TGGCGCCCAA ACCGGTACGG ATCGAACGGC TTGATCTCCT CGCCGTAGCG TTGCCCGATC TGACCATTGC TGTCGAGTGT AGTAAGGGCA CCTATATCCG TGCCTTAGCA CGTGATATTG GCGCGGCGCT TGGCTGTGGT GGCCATCTCG CCTCGCTCCA ACGCATCTTC ACCGGCCCGT TTCGGCTTGA ACACGCAATA CCACTAGCAG CGTTGACCGA TCGGGGAGCG GTGATGCGGC ATCTGCTACC ACCGGAGACG GCCCTGCTCG ATTGGCCGCT TGTGCAACTC GATGCAACCA ATGCATACCG TATCCTGCAC GGTATGTCAA TTCCTGCCGG CGAATCAACG GCTACTCGTG CGCGCGCTCA CGATCCTGAT GGGAAGCTCA TTGCCCTGCT GCGGCGTAAC GGCGAGCGTT GGCAACCCGT GAAAGTTTTT CGTCATCGTT AA
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Protein sequence | MMTDLAGFVI IDKPAGLTSH DVVAHVRRLV GRVVKVGHAG TLDPMATGVL PVALGSATRL LDQLVDTRKG YLGVVRLGIQ TTTDDADGEP LVTQAVPELT PETIETVLTR FRGDILQQPP AFSALHIDGQ RAYALARAGN EVTLAPKPVR IERLDLLAVA LPDLTIAVEC SKGTYIRALA RDIGAALGCG GHLASLQRIF TGPFRLEHAI PLAALTDRGA VMRHLLPPET ALLDWPLVQL DATNAYRILH GMSIPAGEST ATRARAHDPD GKLIALLRRN GERWQPVKVF RHR
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