Gene Cagg_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3564 
Symbol 
ID7266492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4328218 
End bp4329480 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content57% 
IMG OID643568371 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_002464838 
Protein GI219850405 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.988604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA GTTATGACGT TAAAGATTTG AGTCTTGCCG AGCAAGGACG CAAGCGGATT 
GAGTGGGCCG AAAAAGAGAT GCCGGTACTG CGATTGATAC GCGAGCGCTT TGCGCGTGAG
CGTCCACTGG CCGGTTTGCG GATTAGTGCT TGTTTGCACG TGACCACCGA GACGGCCAAC
CTGATGCGTA CACTGGTGGC CGGTGGGGCC GATGTGGTGT TAGTCGCCTC AAATCCGCTG
AGCACCCAAG ATGATGTGGC CGCAGCACTG GTGGCTTACG AAGAGATTCC GGTGTTTGCG
ATCAAGGGTG AGAGTAATGA GGTCTATTAC AGCCATATTC GGGCCGCGCT CGATCACAAT
CCGCAATTGA CGATGGACGA TGGCGCCGAT TTGGTGACCG GCGTGCTCAA GGAGCGGCCC
GACTTGATCC CGCATATGGT TGGGAGTACC GAAGAAACGA CCACCGGCGT GATCCGCCTC
AAGGCGATGG CGAAGCAGGG AGTTTTGCCC TTCCCGGTGA TTGCCGTCAA CGATAGCGAT
ACCAAGCACA TGTTCGACAA CCGGTATGGT ACCGGTCAGA GCACCCTCGA CGGTATCATT
AGGGCCACGA ATATCCTGCT TGCCGGGAAG ACCTTCGTCG TGGCCGGCTA TGGCTGGTGT
TCGCGTGGTA TCGCCGAGCG TGCCCGTGGC TTAGGGGCCA ACGTCATTGT GACCGAGATC
GATCCGGTGA AGGCATTGGA AGCGGTTATG GACGGTTTTC GGGTAATGCC GATGGTAGAG
GCAGCTCGAC AGGCCGACTT TATCGTGACT GCGACCGGTA ATAAGCACGT GATCGACCAG
AATGCGTTTG AGGTGATGAA AGACGGTTGT GTGATCGCCA ATAGCGGTCA CTTCAACGTC
GAGATTAACA TTCCAGCTCT CGAATCACTC AGCGTCGAGA AGCGCCGGCC GCGGGCCTTC
GTCGATCAGT ATATCTTACG TGACGGACGG GTGATTAACC TCTTGGGTGA GGGTCGTCTG
GTCAACTTAG CCAGCGCAGA GGGTCATCCG AGCGCGGTGA TGGATATGAG CTTTGCCAAT
CAGGCTTTGG CGAGCGAGTT TTTGCTGCGC AATCAGGGGA AGCTGCCGGT TGGCGTGCAT
GCGCTCCCTA AGGAGCTGGA TCGGGAAATT GCCGCGTTGA AGTTGGCGGC GATGGGGGTG
ACTATCGACA CCCTCACCCC TGAGCAAGAA GCGTACCTCA ATTCGTGGCA AGAAGGAACG
TAA
 
Protein sequence
MTMSYDVKDL SLAEQGRKRI EWAEKEMPVL RLIRERFARE RPLAGLRISA CLHVTTETAN 
LMRTLVAGGA DVVLVASNPL STQDDVAAAL VAYEEIPVFA IKGESNEVYY SHIRAALDHN
PQLTMDDGAD LVTGVLKERP DLIPHMVGST EETTTGVIRL KAMAKQGVLP FPVIAVNDSD
TKHMFDNRYG TGQSTLDGII RATNILLAGK TFVVAGYGWC SRGIAERARG LGANVIVTEI
DPVKALEAVM DGFRVMPMVE AARQADFIVT ATGNKHVIDQ NAFEVMKDGC VIANSGHFNV
EINIPALESL SVEKRRPRAF VDQYILRDGR VINLLGEGRL VNLASAEGHP SAVMDMSFAN
QALASEFLLR NQGKLPVGVH ALPKELDREI AALKLAAMGV TIDTLTPEQE AYLNSWQEGT