Gene Cagg_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3548 
Symbol 
ID7266476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4311766 
End bp4312632 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID643568355 
Productprotein of unknown function DUF161 
Protein accessionYP_002464822 
Protein GI219850389 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT CATCGCGCTG GCGGCGGATT GCCAGCACAA TGTACGACTA CGTTTTGCTC 
ACGATTGGCG CGCTGCTCAG CGCCACTGCC GTGCGCTTCT TTCTAGTGCC GAATCAGGTG
GTGAGCGGCG GCATTACTGG CGTGGCCCAG TTGCTGAACA CCTTCCTCGG TACACCGGTC
GGCGCGGTGG TGCTGATCCT CAACGTACCG TTGCTCATTA CCGGCTGGCG CTACCTCGGC
GGGGCGGTCT TCGGCGTGCG CACGTTTTAC ACGGTGGTGG TGATGTCGCT GGCGATCGAT
GTCCTCACCC CTTTTGCCCG CCCGATCACC AACGATCCGC TGCTGTACAG CCTCTACGGC
GGCCTGATTG ACGGCTTGGG GATCGGGTTG GTCTTGCGCG CACGCGGCAC CACCGGCGGG
AGCGATATTC TCGCCCGTCT GATCGAGCGG CGTTTTGGCA TTCAACCGGG TCGCAGCTTG
TTAGGCTTCG ACACGATGGT CTTTACCGCG GCCCTGTTTA GCTACGGCCC CGAAAAGATT
CTGTACGCGC TGCTGGTGGC GTTTACCTCT AGTCGGGCGA TTGACACGGT GCTGGCTGCC
GGCAAAGGCG CACGGCAGGC GCTGATTATC ACCTCTACCC CAGAACCGAT CCGGCAAGCC
GTGCTCCACC GGCTCGGTCG CGGCCTTACC CAACTCGAAG GCATTGGCGG CTACACTGGT
ATGACGCGGG CCGTGTTGCT CTGCGTGGTG GCCCGCACCG AAATTGGTGC GCTCAAGAAT
ATCATTAGTA CGGTTGACCC CGCCGCCTTC GTGATTGTCG GCGAGGTCGA CGAGGTGATC
GGCGAAGGGT TTAGTCGCTC AACGTGA
 
Protein sequence
MTASSRWRRI ASTMYDYVLL TIGALLSATA VRFFLVPNQV VSGGITGVAQ LLNTFLGTPV 
GAVVLILNVP LLITGWRYLG GAVFGVRTFY TVVVMSLAID VLTPFARPIT NDPLLYSLYG
GLIDGLGIGL VLRARGTTGG SDILARLIER RFGIQPGRSL LGFDTMVFTA ALFSYGPEKI
LYALLVAFTS SRAIDTVLAA GKGARQALII TSTPEPIRQA VLHRLGRGLT QLEGIGGYTG
MTRAVLLCVV ARTEIGALKN IISTVDPAAF VIVGEVDEVI GEGFSRST