Gene Cagg_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3542 
Symbol 
ID7266470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4307686 
End bp4308390 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID643568349 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002464816 
Protein GI219850383 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA GCGTCGAAAT GTATTTGGTG ATGACGGCCC TCTTGCGCAA AGCGCCCGAT 
CAGCCGGTGC CGCTGTCGGT GCTGGCTAGC CGGCTTGGGG TGTCGCAAGT CTCGGCCAAC
GAAATGTGCC ATCGCTTACA AGAACGCGGC TTCCTCTGCT ACCAGCCCTA CCACGGTGTC
ACTCTCACCC CCGATGGTGA AGAGTGGGCG CAGCGGATAC TCTCGCGCCG GCGGATGTGG
GTGATTTTTC TGGTCGAAAA CCTCGGCATC GATCCGGCGG AGGCCGATGC GCTGGCGTGC
CAACTCGAAC ATATCACCTC AGAGCGGCTC GATGCAGCAT TGAAAGCATT TCTAGAGCGC
GACCCCGCGA CGCGGATCGA TGCCGAAGCA ATGCCGCAAT CGCTCGCTGC CTGCACCGCC
GGCACGCACG GCGTGATCAC AACGATTGAC GCGGAACCGG CAGCCTCTGC CTTTCTCGCC
CGGCAAGGGT TGGCTCCCGG CGCTACCGTC GAGGTATTGG CGGTCAGTGA CGATCAATCG
GTGTTGGTGC AAACCGGCGA ACACCAACTC GCCCTTGCGC CCTCGCTCGC GGCGCGGGTG
ATGATGGCGG TCCCCGCTGC CGATCGGCGG GCCGCTTGGC GGCGGTGTAG CGCATTTTGG
GCTTGTGTGC GCGGTGAACC CCACGAGTGC CCGCCGGTTA GGTAG
 
Protein sequence
MSESVEMYLV MTALLRKAPD QPVPLSVLAS RLGVSQVSAN EMCHRLQERG FLCYQPYHGV 
TLTPDGEEWA QRILSRRRMW VIFLVENLGI DPAEADALAC QLEHITSERL DAALKAFLER
DPATRIDAEA MPQSLAACTA GTHGVITTID AEPAASAFLA RQGLAPGATV EVLAVSDDQS
VLVQTGEHQL ALAPSLAARV MMAVPAADRR AAWRRCSAFW ACVRGEPHEC PPVR