Gene Cagg_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3540 
Symbol 
ID7266468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4306339 
End bp4306905 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content59% 
IMG OID643568347 
Producthypothetical protein 
Protein accessionYP_002464814 
Protein GI219850381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTGT TTGCTAGCAA CGCGGCCAGC ATCACGAAAC TAATCGAACA GCGCAGCGAG 
AACGCGCTAG CCCGCAACGC CCAATTCCAA GCGGTGACCC AAAGCTTGCC GGATGACCGG
ATTGGCACGA TCTACATCGC GGGGGAAGCG CTGGCGCGCT TTTTTGACAG CTTATTCGAG
GCAGGCGCAC TTGATGAGAG CAACTTTTCC ATCGCCGATG TCCGCTCGGC GACGCAGGCT
ATGCAAGGCG TTGGTTTCAC GATGGCGGTG ATCGATAGCG GGTTGCGCTT CGATGCGGTC
ACTGTTTTTG ATCAAACCCG GCTGAGCAGC GAACTGCGCG ACCAGCTCAG CAGCTTTCGC
CCAACCGTCT CGCCCGAACG GGCCGGCGAG GTCAGCAGTG TGGCGATCGG CATATTCAGC
TTCGCCATTC CTGCTGATTG GGGCGAGCGG CTGGCGACCA GCTCGATTCG GCACCTGAAA
CCGCCAATAC CCTCCGCAAT CTCGAAGATA ATCTTGGTAT CGATCTCGAC CGTGACCTAT
TTAGCTGGTT CCACGGCGAA GGGGTAA
 
Protein sequence
MVVFASNAAS ITKLIEQRSE NALARNAQFQ AVTQSLPDDR IGTIYIAGEA LARFFDSLFE 
AGALDESNFS IADVRSATQA MQGVGFTMAV IDSGLRFDAV TVFDQTRLSS ELRDQLSSFR
PTVSPERAGE VSSVAIGIFS FAIPADWGER LATSSIRHLK PPIPSAISKI ILVSISTVTY
LAGSTAKG