| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3507 |
|---|
| Symbol | |
|---|
| ID | 7266435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4275290 |
|---|
| End bp | 4275976 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643568315 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002464782 |
|---|
| Protein GI | 219850349 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATC CACTGCTTGA AATCCGTAAC CTGCATAAAT CCTTCACCCT GCACCTGATC
GATGGGCGCG AAATCACGCC GGTGCGCAAC GTAAACCTCA GCATCGCCGC CGGCGAACAC
CTGCTCATCT ACGGGCGCAG CGGCATGGGC AAGACCAGCA TTCTCAAGTG CATCTACCGC
ACCTACCTGC CAACTTCCGG CCAGATCTGG TTTGACTCGC ATCAATTTGG CCGCATCGAC
CTCAGCCGCG CTGCCGAGAG CGTCATCCTC AGCCTGCGCG AGCGCGAGAT CGGCTTCTGC
TCGCAATTCC TGCGCGTCCT GCCTCGTGTT TCGGCGCTCG ATACCCTCTG CGAACCGCTC
TACCGGCAGG GGATGGATCG CGCAACCGCG CAAGAGATTG GCCGGGAATG GCTGCAACGG
CTCAGCATCT CGCCGGCGCT GTGGCAAGCC AGCCCGCTCA CCTTCAGCGG CGGAGAGCAA
CAACGGATCA ATCTTGGGCG AGCCTTTATT GCTCGCCCGC GCCTGCTGCT GCTCGACGAG
CCAACCGCCA GCCTCGACGA AGCGACTAAG CAGGTGGTGA TTGCGATGAT CCGGGCCGCC
CAATCCGAAG GCGCCGCGAT CATCAGCGTC TCGCACGACT TGGCCGGGCT AGGGGCGCAC
ACCACCCGGC AATGGACGTT CGCGTAG
|
|---|
| Protein sequence | MSHPLLEIRN LHKSFTLHLI DGREITPVRN VNLSIAAGEH LLIYGRSGMG KTSILKCIYR
TYLPTSGQIW FDSHQFGRID LSRAAESVIL SLREREIGFC SQFLRVLPRV SALDTLCEPL
YRQGMDRATA QEIGREWLQR LSISPALWQA SPLTFSGGEQ QRINLGRAFI ARPRLLLLDE
PTASLDEATK QVVIAMIRAA QSEGAAIISV SHDLAGLGAH TTRQWTFA
|
|---|
| |