Gene Cagg_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3499 
Symbol 
ID7266427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4265292 
End bp4265816 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content47% 
IMG OID643568307 
Productprotein of unknown function DUF1003 
Protein accessionYP_002464774 
Protein GI219850341 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTC ATCTCCCACA ACCACCTCAC GCGCTGAGTG AATTACGTCG CCAACGCCAA 
CCGATACGCG ATGTCAATCG CGAGCATAGT GAACAAATAG GTCGTCTTGA TCGATTGGCA
TTATTTATCA CCGAGCGAGT TGGCACAATG GGTTTCTTTT TGGCTATTTT TACCTGGACG
GTGGTATGGC TAGGATGGAA TTTACTAGCA CCTAAACCGC TCCAGTTTGA TCCACCGATG
GCTTTTGTGT TCTGGCTCTT TATTTCAAAC ATGATTCAAA TCTTGCTGAT GCCGTTGTTA
ATGGTCGGAC AAAATCTCCA AGGACGCCAT GCCGAACTGC GTGCTCAGAG CGATTATGAA
GTTAATCTCC GCGCTGAACG CGAAATTGAT GCGATATTAC AGCATCTGGA ATATCAAAAC
GCGCTGTTGC ATGCTCTGCT TATCAAAGCC GGAATACCGA ACGATCAACT GCCGCCTATA
CCGGTATTCA CCGTTCAGAC CACCAACAAG ACCGAGCAGT CCTAG
 
Protein sequence
MHFHLPQPPH ALSELRRQRQ PIRDVNREHS EQIGRLDRLA LFITERVGTM GFFLAIFTWT 
VVWLGWNLLA PKPLQFDPPM AFVFWLFISN MIQILLMPLL MVGQNLQGRH AELRAQSDYE
VNLRAEREID AILQHLEYQN ALLHALLIKA GIPNDQLPPI PVFTVQTTNK TEQS