Gene Cagg_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3485 
Symbol 
ID7266413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4249650 
End bp4251023 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content56% 
IMG OID643568294 
ProductSCP-like extracellular 
Protein accessionYP_002464761 
Protein GI219850328 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTATC GATTAAGCCG GTGCTTCCAC ATAGTGGTGA CTGTGATGCT CCTATCGATG 
TTGCCGGTGC AATCTGTACG AGCGCAGAAC CGTATCTGCT TCACCGAGGT GCCTGATTGT
ATTGAAGGCC GGTTTGCCGA ATACTGGCAG CAGCACGGAG GCTTACCGGT GTTTGGGTTT
CCGATCACGC CGGTGTTTGA GCAAGAGGTC GAAGGCCGGG TTTATAAGGT GCAAATCTTT
GAACGCAATC GCTTTGAACT TCACCCAGAA CTGGCGCGCC CGTATGATGT CTTGCTCGGT
CGGTTAGGTG ACGATCTGTT GCAACGGCGG GGGACACCGT GGCAAAACGA ACCGAAAGCG
CCGGTGATGC AGCAGGCCGG TTGTCGCTAT TTCGCCGAGA CCCAGCATCT CGTATGTGAC
GCATTTCTGC GGTATTGGCA ATCGCATGGG CTTGAGTTTG ATGGGCGGTC GGGGTTTAGT
GAAGCGGAGA GTCTGGCACT TTTTGGTTTG CCGTTGACCG AACCGCGGAT AGAGACAAAC
TCGTCGGGTG ATACGGTCCT GACGCAGTGG TTTGAGCGGG CGCGGTTTGA GTTGCATCCC
TACCTTGGCC CTGAAGTGGT CTTACTCGGT TTGCTTGGTC GGGAAGCATT TAACGTAAGC
ACGCCATCGG TGGTTTTGCC GGACGATTGG TTAGGACGGC TCAATGCCTA TCGGGTATTG
GCCGGTTTAT CGCCGGTGCA AGAAGATGCG GTTCTGAATG AGCGTTGTTT TCAGCATGCC
CGCTATATGG CCGAGAACAG TGATCTGACG CATCAGCAAA ATCCATCGCT TCCGTATGCT
TCACCAGATG GACAAATCTG TGCGCAGCAC GGTAATGTTT GGCTCGGTTG GGGCACAAGG
TGGCAACCGG TGCATGCCAT CGATGGGTGG ATGGAGTCGG TTGGGCATCG GTTGTGGATG
TTGTATCCAA CGCTGCGGTT GGTTGGGTTC GGTTTCTACA CGACTGCGAG TGGCTTACAG
AGTGCGGCAG CGCTCGATGT GTTGTCGAAT TTTAATGAAG GTGTTGATTA TCCCGGCTGG
CCGGTGCGTT ATCCGGGGGC CAACCAACAA GGGGTGCCAG CGACCATCTA TCCGATCACG
CTGCACTGGC GCTATTTCGG TAATGCTCCA GTGGTCACGG CGACCGAGCT GCGGGTGGTG
AGCGGCGCGA CGTTGCCGCA TACGGTTTCG ACCGATTTGC CTGCTGGCCA TAAGGGGATC
ATGATCATAC CCGCACAGCC ACTGCCGGCA TTGGCAACGA TTGAGGTGAC AGTAGCCGGT
AATTATGACG GACGCACGTT TACCTACACG TGGCGGTTTC AGACGGGGTG GTGA
 
Protein sequence
MWYRLSRCFH IVVTVMLLSM LPVQSVRAQN RICFTEVPDC IEGRFAEYWQ QHGGLPVFGF 
PITPVFEQEV EGRVYKVQIF ERNRFELHPE LARPYDVLLG RLGDDLLQRR GTPWQNEPKA
PVMQQAGCRY FAETQHLVCD AFLRYWQSHG LEFDGRSGFS EAESLALFGL PLTEPRIETN
SSGDTVLTQW FERARFELHP YLGPEVVLLG LLGREAFNVS TPSVVLPDDW LGRLNAYRVL
AGLSPVQEDA VLNERCFQHA RYMAENSDLT HQQNPSLPYA SPDGQICAQH GNVWLGWGTR
WQPVHAIDGW MESVGHRLWM LYPTLRLVGF GFYTTASGLQ SAAALDVLSN FNEGVDYPGW
PVRYPGANQQ GVPATIYPIT LHWRYFGNAP VVTATELRVV SGATLPHTVS TDLPAGHKGI
MIIPAQPLPA LATIEVTVAG NYDGRTFTYT WRFQTGW