Gene Cagg_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3478 
SymbolchlL 
ID7269704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4241346 
End bp4242167 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content56% 
IMG OID643568287 
Productprotochlorophyllide reductase iron-sulfur ATP-binding protein 
Protein accessionYP_002464754 
Protein GI219850321 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01281] light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAA TCCTCGCGAT CTATGGCAAA GGTGGAATCG GTAAATCGAC CACCTCGGCT 
AATCTCTCGG CGGCAATGGC GCTCAAGGGG GCGAAAGTCT TGCAGATCGG CTGTGATCCG
AAGCACGATA GCACGTTCCC TCTCACCGGT CATCTCCAGC CGACCGTGAT CGATGTGCTG
GACAGTGTGA ATTTTCACCT TGAAGATGTG AGCAAAGAGG ATGTCATCCG CACCGGCTTT
GCCGGCGTTG ATACCCTTGA GTCGGGTGGT CCACCGGCCG GTAGTGGTTG TGGTGGCTAT
GTCGTAGGTG AGACGGTGAA GTTACTCAAA GAATTTGGGC TGTACGACAA ATATGATGTA
ATTGTCTTCG ACGTGCTTGG CGACGTGGTG TGCGGTGGCT TTTCAGCGCC GTTGAACTAT
GCCGACTACG GTCTTATCAT CGCCTGCAAC GATTTCGATA GCATTTTCGC CGCCAACCGG
CTTTGTCTGG CAATTGCCCA GAAGTCGCAG CGCCATAAGG TGAAACTGGC CGGGATTATC
GCGAACCGCG TCGATTATGA GTATGGCGGT GGGACGTCGC TCCTCGATCA GTTTGCCGAG
AAGGTCGGCA CGAAGGTGAT TGGTCGAGTG CCGTACCACG ATCTCATCCG CCGTTCGCGT
CTCGCCGGGA AGACGCTGTT CGAGATGGAG GGGCCGGGCA AAGAGGAATG CACCCGTCCC
TTTGAAGAAA TGGCCGAGTA TCTGTTGGCC CAACCCCAAG CGACCATCCC CAATCCTTAT
CACGACCGCG CGATTTTCGA GGCTATCGGT GGTTGGCGCT GA
 
Protein sequence
MSLILAIYGK GGIGKSTTSA NLSAAMALKG AKVLQIGCDP KHDSTFPLTG HLQPTVIDVL 
DSVNFHLEDV SKEDVIRTGF AGVDTLESGG PPAGSGCGGY VVGETVKLLK EFGLYDKYDV
IVFDVLGDVV CGGFSAPLNY ADYGLIIACN DFDSIFAANR LCLAIAQKSQ RHKVKLAGII
ANRVDYEYGG GTSLLDQFAE KVGTKVIGRV PYHDLIRRSR LAGKTLFEME GPGKEECTRP
FEEMAEYLLA QPQATIPNPY HDRAIFEAIG GWR