Gene Cagg_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3460 
Symbol 
ID7269685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4216518 
End bp4217492 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content53% 
IMG OID643568268 
Productdeoxyhypusine synthase 
Protein accessionYP_002464736 
Protein GI219850303 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1899] Deoxyhypusine synthase 
TIGRFAM ID[TIGR00321] deoxyhypusine synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0388485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAG CGGTGACTCA ATTTATTCGA CACCATTTTC GTCACTTCAA CGCGGCTGCG 
TTGGTCGATG CGGCTGATGC CTACAACGCC CATCTGGCTA ACGGCGGCAA AATGATGATC
ACCCTCGCCG GTGCAATGAG TACCGCCGAA CTTGGCCTCT CGTTGGCCGA GATGATCCGA
CAAGACAAGG TTCACGCCAT TTCGTGTACC GGTGCCAACC TTGAAGAAGA TATTTTTAAC
CTGATTGCCC ATAACTTTTA CGAGCGAGTG CCACACTACC GTGACCTCAG CCCACACGAT
GAGCAAGCTC TGCTCGAACG TCATATGAAT CGAGTGACCG ATACCTGCAT CCCTGAAGAA
GAGGCGATGC GCCGACTTGA GAAGGCTCTT CTCGCTGAGT GGATGAACGC TGACCGGACC
GGTGAGCGCT ACTTCCCGCA CGAGTTTATT TACCGTATCC TGCGGTCGGG TCAGTTGGCA
CAGTATTATC AGATCGATCC GCGCGATTCG TGGGTCTATG CTGCGATGGA GCGCAATTTA
CCGATATACG TACCGGGATG GGAAGACTCA ACCACCGGTA ATATGTACGC GGCCCACTGT
ATCACCGGTG AGATTAAGAA TGTCCATACC GTCCGCACCG GGATCGAATA CATGATCGAT
CTGGCCGATT GGTACATCCG CACCTCAGCC GAGGCCTCCA TCGGCTTTTT CCAGATCGGT
GGCGGTATCG CCGGCGATTT TCCGATCTGC GTCGTGCCAA TGCTGCATCA AGACCTCGGT
CGTGAAGGGG TACCGGTGTG GGGCTATTTC TGCCAAATCA GCGATTCGAC GACTAGCTAT
GGTTCGTATT CCGGCGCCGT TCCCAACGAG AAGATTACTT GGGGCAAGTT GGCCGTCAAC
ACACCGAAGT TTATTATTGA ATCGGATGCG ACGATTGTAG CACCGTTAAT CTTTGCAATG
GTGCTAGGGT GGTAA
 
Protein sequence
MNGAVTQFIR HHFRHFNAAA LVDAADAYNA HLANGGKMMI TLAGAMSTAE LGLSLAEMIR 
QDKVHAISCT GANLEEDIFN LIAHNFYERV PHYRDLSPHD EQALLERHMN RVTDTCIPEE
EAMRRLEKAL LAEWMNADRT GERYFPHEFI YRILRSGQLA QYYQIDPRDS WVYAAMERNL
PIYVPGWEDS TTGNMYAAHC ITGEIKNVHT VRTGIEYMID LADWYIRTSA EASIGFFQIG
GGIAGDFPIC VVPMLHQDLG REGVPVWGYF CQISDSTTSY GSYSGAVPNE KITWGKLAVN
TPKFIIESDA TIVAPLIFAM VLGW