| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3455 |
|---|
| Symbol | |
|---|
| ID | 7269680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4208909 |
|---|
| End bp | 4210642 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643568265 |
|---|
| Product | glyoxylate carboligase |
|---|
| Protein accession | YP_002464733 |
|---|
| Protein GI | 219850300 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3960] Glyoxylate carboligase |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type
[TIGR01504] glyoxylate carboligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.13774 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.152002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGCA TGAACGTGAT GGATGCGGTG ATCAACGTGT TAGAGAGCGA AGGTGTGCGT
TACATCTTCG GTGTGCCGGG AGCAGCCATC TTACCGTTCT ACGACGCTCT GCGCAAAAGC
AAGCAGATTC GGCACCTCAT CGTGCGCCAC GAAGAGGGTG GCACGCACGC TGCCGACGGC
TATGCACGTG CGTCCGGCGA GGTCGGAATC TGTGTCGGCA CCAGTGGGCC AGCCGGTACC
AATATGATTA CCGGTCTCTA CACCGCAATG GCCGACTCGA TCCCGATCAT CTGCATCACC
GGTCAAGCAC GCACGGATGC TTTGCACAAA GAAGCGTTTC AGGCTGTTGA TATTGTCGAG
ATCGCCAAAC CGGTGACCAA ATGGGCCGTG CAGGTAAAGG AGGCAGCACA GATGCCGTGG
GTCTTTCGAC GCGCCTTTCA GATTGCCCGT GAAGGGCGTC CCGGACCGGT TCTGATCGAC
CTCCCGATCG ATGTACAAAA ACAAGCGATC GATTACGATG CGAGCCTGGA TGCCCCCTTA
CCGATATATC GCCCGGCGCC GTTACAATCA GCCCTGCGGC GGGCGATCGA GCTGCTCCTG
ACCGCTGAGC GACCGCTACT GATGTCCGGC GGCGGGGTGA TCATTGCCAA TGCCGCACCG
GAATTGGTCG CCTTAGCGGA ATATTTGCAA ATCCCTGTTT CACCGACGCT CATGGGTAAA
GGGGCAATTC CCGAAGACCA CCCTCTCTAC GCCGGCATTG TCGGTATTCA GACCCAACAG
CGCTTTGCGA ACGCAATTTT TCTCGAAAGT GATTGTATCC TCGCAATCGG GGCACGTTTC
GCCGACCGCC ATACCGGCCA ACTCGATATC TATCGCGGTA ATCGCACCTT TATCCACATC
GACATTGAGC CAACACAAAT TGGGAAGGTC TTCCATCCCG ATCTCGGTAT TGTTGGCGAT
GCCAAACTAG CCCTCCAAGG GCTATTGGCC GAGGCACACG ACTGCACACC ACCACGTACA
CCCGGTGCAT GGTTCGAGCG GGTGCAGTAT CTAAAACAGA CCCTGACCCG TCGCGACGAT
TTCGACGACG TTCCGATTAA AGCACCGCGA GTGTTCCGCG AGCTGAACGA GTATTTTGAT
CGTGACACCA TCTTCGTCAC TGCAATCGGG CTGTATCAGA TCTGGTCGGG TCAATTCCAA
AAGACCTACA AACCGCGCCA CTATATGGTG TGCGGTCAGG CAGGGCCACT CGGTTGGGAA
GTGAGTGCCT GCACCGGTGT CAAACTGGCC CGGCCCGACC AACAAGTGGT TGGTGTTGTG
GGAGACTACT CTTTCCAATT TTTGATGGAA GAGGTGGCAG TAGCAGTACA ATATCGTATC
CCGTTCGTGT TGGTGATGAT TAACAACACC TACATGGGCC TGATTCGTAT GGCCGAACTG
CCCTACCAAA TGAACTACGA AGTAAAGCTG GGATACGAGA CTGATACCGG TCAAACATTT
GGAATTGATC ACTGCAAAGT GATGGAAGCG ATGGGAGCGC TTGCCGTGCG TGTGACCACA
CCCGATCAGA TTCGACCGGC GCTCGATTGG GCAGTGCGCG AGAGCAACCA TCGCCGGTTA
CCGGTGCTCG TGGAAGTGAT GACGGAAGCC GAAGAAAATG CAGCTATGGG TACGCGCATT
GATCAGATTC GCGAATGGCA CCCACTGCCA GAGATGACGA GCACCACCAT TTAG
|
|---|
| Protein sequence | MPRMNVMDAV INVLESEGVR YIFGVPGAAI LPFYDALRKS KQIRHLIVRH EEGGTHAADG
YARASGEVGI CVGTSGPAGT NMITGLYTAM ADSIPIICIT GQARTDALHK EAFQAVDIVE
IAKPVTKWAV QVKEAAQMPW VFRRAFQIAR EGRPGPVLID LPIDVQKQAI DYDASLDAPL
PIYRPAPLQS ALRRAIELLL TAERPLLMSG GGVIIANAAP ELVALAEYLQ IPVSPTLMGK
GAIPEDHPLY AGIVGIQTQQ RFANAIFLES DCILAIGARF ADRHTGQLDI YRGNRTFIHI
DIEPTQIGKV FHPDLGIVGD AKLALQGLLA EAHDCTPPRT PGAWFERVQY LKQTLTRRDD
FDDVPIKAPR VFRELNEYFD RDTIFVTAIG LYQIWSGQFQ KTYKPRHYMV CGQAGPLGWE
VSACTGVKLA RPDQQVVGVV GDYSFQFLME EVAVAVQYRI PFVLVMINNT YMGLIRMAEL
PYQMNYEVKL GYETDTGQTF GIDHCKVMEA MGALAVRVTT PDQIRPALDW AVRESNHRRL
PVLVEVMTEA EENAAMGTRI DQIREWHPLP EMTSTTI
|
|---|
| |