Gene Cagg_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3454 
Symbol 
ID7269679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4205326 
End bp4206855 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content54% 
IMG OID643568264 
Productpotassium/proton antiporter 
Protein accessionYP_002464732 
Protein GI219850299 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00729546 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG AACCGCTATT ACTCATCACC GGCTTACTAT TAGCAATCAG TGTCGCGGCT 
ACGCGCGCAT CCAACCGTTT CGGCATACCG GCCCTGATCC TCTTCATAAC GATAGGCATG
CTGGCCGGTT CTGATGGGCC GGGTAGGATC GCCTTTACCG ATGCAGGGTT GGCGCAACTG
ATCGGTGTCG TCGCCTTGAT CTATATCCTT TTTTCTGGAG GCTTAGATAC TGATTGGTCG
ATTATCAAAC CGGTTCTTGC CGAGGGTCTG ATCCTCGCGA ATATCGGTGT ACTTGCCAGT
ACGATGATCG CGGCGGTTGG GGCGCACCTC ATCCTTGGTT TCGATTGGCT GCTCGCCCTT
CTGCTCGGCG CAATCGTCTC ATCAACCGAC GCAGCAGCCG TCTTTAACGT AATGCGAACC
CGTGGTATTT ATCTCAGGCA CCGGCTTGAA CCGCTGATCG AACTCGAGTC GGGGAGTAAC
GACCCGATAG CCGTCTTTCT CACCGTCGGC CTCACCCAAC TGCTGATCAA TCCCGACTCA
TCGCTCTATA CACTGATTCC GGCTTTCATC TTGCAGATGT TGCTTGGCGC TGCTGGCGGG
TATGCGTTTG GGCGGCTGAT GATCTGGGTG GTGAACCGGA TCCGCCTCCA ACAAGAAGGG
CTGTACATCG TGTTAACGAT GGCGCTCACG CTGCTGACCT ACGGGTTCAC GGCAATTATC
GGCGGTAATG GATTTTTAGC GGTGTATTTG GCCGGGATTA TGCTCGGCAA CGCCAACATC
GTTCACAAGC GATCGATCTT GCGTTTTCAC GATGGCATTG CGTGGCTGAG CCAGATTGTT
ATGTTCCTTG TGTTAGGATT GCTCGTCGTA CCGTCACAAC TACCGGCGGT TGCGGGGCAA
GGGCTTGCAA TGGCGTTTTG GCTGGTATTT GTCGCTCGTC CGCTCTCGGT ACTTATCGCA
CTCGGCTGGA CAAAGCGCTC GTTGTCGCAA CTGCTTATGG TTTCGTGGGC AGGCCTTCGT
GGAGCAGTAC CGATTGTTCT CGCCACCTTT CCCTTGCTAG CCGGTGTACC CGATGCACCA
CTCCTGTTTA ACCTTGTCTT TTTCATCGTG CTGGTATCGG TACTCGTCCA AGGCATTTCA
ATCAGTTGGG TAGCACGCAA ACTTGGTGTG ATGGCCGATC AACCCGAACT CATTGACAGC
CATCTCTTTG TGCCCGACGT CAGCGGTGCG AGTCAGATTC TCGAAGCGCA TATCCCACCT
GACTCGGCAT TAGTGGGCAA ATCCATAATC GAAGCCGACT TACCACGCGG AGTGTTAATC
GTCCAGATTC AGCGGACCGA TGGCTACCTC ATTCCTAACG GCAGCACCGT CTTTGCACCC
AACGATCGGC TGGTGCTGCT GGTAGCACCA ACAGCACTAT CGGCGATCAC AGAGCTTTGC
GCGAGTTGCA GTCTCAATCC GATCGGGCCG ATCAAAATCG GCGCCCAAGG ACAAGTAGAG
GCACAGGCAA CTGAAGTAAA GACAAATTAA
 
Protein sequence
MATEPLLLIT GLLLAISVAA TRASNRFGIP ALILFITIGM LAGSDGPGRI AFTDAGLAQL 
IGVVALIYIL FSGGLDTDWS IIKPVLAEGL ILANIGVLAS TMIAAVGAHL ILGFDWLLAL
LLGAIVSSTD AAAVFNVMRT RGIYLRHRLE PLIELESGSN DPIAVFLTVG LTQLLINPDS
SLYTLIPAFI LQMLLGAAGG YAFGRLMIWV VNRIRLQQEG LYIVLTMALT LLTYGFTAII
GGNGFLAVYL AGIMLGNANI VHKRSILRFH DGIAWLSQIV MFLVLGLLVV PSQLPAVAGQ
GLAMAFWLVF VARPLSVLIA LGWTKRSLSQ LLMVSWAGLR GAVPIVLATF PLLAGVPDAP
LLFNLVFFIV LVSVLVQGIS ISWVARKLGV MADQPELIDS HLFVPDVSGA SQILEAHIPP
DSALVGKSII EADLPRGVLI VQIQRTDGYL IPNGSTVFAP NDRLVLLVAP TALSAITELC
ASCSLNPIGP IKIGAQGQVE AQATEVKTN