Gene Cagg_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3453 
Symbol 
ID7269678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4204617 
End bp4205267 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content53% 
IMG OID643568263 
Productphosphate uptake regulator, PhoU 
Protein accessionYP_002464731 
Protein GI219850298 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0109346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.62241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCGC GTGAGCATTT TGATCAAGAA TTGGACGCCC TGCGTAATCA GGTGTTAGCG 
TTGGGTCAGA CGGTGAGCAG TGCGCTTGAT CGGGCAATCA CCGCGCTGGA ACGGGGTGAT
CGCGAATTGG CACAGGCAGT CGTTGACGGT GATGAGGCGG TGAATAAAGC ACAGACTGCT
ATCGAGCAAC ACGCCGTTCA TCTGATTGCG ACCCAGCAGC CAGTAGCACG CGATCTGCGC
CGCATCATCG CCGCCATCGC GATTGGTTAT GAGCTTGAGC GGATCGCCGA TTATGCGAAG
AGTACGGCGA AAATGGTCGT TGGTAGCCCC AATGCGAATC GTGGTCCTCT CTCACCGCCG
GCTGAGTTAG TCGAGTTGGG TAAGATAGCA CGCATTAATC TGGATCGGAC GTTGTTGGCG
TTTGGTGATG GTAGTTCCGA GGCGATTAAG GGGATCATTG AGCAGGAGGA TGAGATCGAT
CACAAGTATA AACGCCTGAA ACAAGCGTTG GTTGCACAGT TGACTCCGCC GGAGACGGCT
GATCTGCTGT TTATTGCTCA TAACTTCGAG CGCGTTTCGG ATCGGGCGTT GAATATGGCT
GAGAAGATGA TCTTTATCAA CAGCGGTGAC CAGGTTGAGT TGAACGATTA A
 
Protein sequence
MRPREHFDQE LDALRNQVLA LGQTVSSALD RAITALERGD RELAQAVVDG DEAVNKAQTA 
IEQHAVHLIA TQQPVARDLR RIIAAIAIGY ELERIADYAK STAKMVVGSP NANRGPLSPP
AELVELGKIA RINLDRTLLA FGDGSSEAIK GIIEQEDEID HKYKRLKQAL VAQLTPPETA
DLLFIAHNFE RVSDRALNMA EKMIFINSGD QVELND