Gene Cagg_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3452 
Symbol 
ID7269677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4194303 
End bp4194584 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content54% 
IMG OID643568262 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002464730 
Protein GI219850297 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0545024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.115549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACC TTATCAGCTA CGATATCAGT GTTGATCGGC GTCGGCTCAA GCTAGCCAAA 
CTCCTCGAAG GGTACGGCCA GCGGGTCTTA GAGAGTGTCT TTGAATGCGA TCTGGAGGCA
AGTGCCTACC GACAGCTCAA ACAGAAACTC AGCCGTCTCA TCAACGTCGC CGAAGGCGAC
CGGCTACGCA TCTACCAACT CTGCGGCATA TGCCGACACA ACGTCGAGAT CATCGGCGAA
GGACCACCGC TCGAAACGAG TCACGACGTC TACATCTTCT AA
 
Protein sequence
MLYLISYDIS VDRRRLKLAK LLEGYGQRVL ESVFECDLEA SAYRQLKQKL SRLINVAEGD 
RLRIYQLCGI CRHNVEIIGE GPPLETSHDV YIF