Gene Cagg_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3424 
Symbol 
ID7269649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4162687 
End bp4163259 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content59% 
IMG OID643568234 
Productprotein of unknown function DUF461 
Protein accessionYP_002464702 
Protein GI219850269 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.119907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGTC TCTTGATGCT GTTGGCATTG GCAATGATGG TGGTGGGGTT GGCTGGCTGT 
GGCGCGAGCC AGAGCGGGAC GCAGAGCACG AGCCAGAGCG GGACGCAGAC TGGCGGTATT
ACCGTGCGCG ATCCGTGGGT GCGCGCCGCG ATGATGAATA TGGCTGGCGA TCAGTCGGGC
GCAATGGGCA ATATGCAGCA GAGCAATATG CAGAGCACGC CGATGGCCGG GATGCAGGAT
CACGGCAATA TGGCCGGCTC TGCGGTGAGC GCTGCCTACA TGGTGGTGGT TAACAACAGC
AACACTGCGG ATGCCATCGT CAAGGCTGAT AGCGATGTCG CCAAGTCGGT CGAACTGCAC
AACGTGATTA TGGAAAACAA CGTGATGCAG ATGCGGCAAG TTGAAGCAAT TGAGGTGCCG
GCTAACGGGC AAGTTGAGCT GAAGCCGGGC GGCTATCACG TGATGCTGAT CGGCTTGAAC
CGCGATCTCA AGGAAGGCGA AGAGGTGCTG ATCAAGCTCA CCACCCGCAG CGGCCAAACG
ATTGAAGTCA AGGCGCCAGT GCGCAAGCCG TAA
 
Protein sequence
MRRLLMLLAL AMMVVGLAGC GASQSGTQST SQSGTQTGGI TVRDPWVRAA MMNMAGDQSG 
AMGNMQQSNM QSTPMAGMQD HGNMAGSAVS AAYMVVVNNS NTADAIVKAD SDVAKSVELH
NVIMENNVMQ MRQVEAIEVP ANGQVELKPG GYHVMLIGLN RDLKEGEEVL IKLTTRSGQT
IEVKAPVRKP