Gene Cagg_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3399 
Symbol 
ID7267139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4128768 
End bp4129820 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content52% 
IMG OID643568208 
ProductSaccharopine dehydrogenase 
Protein accessionYP_002464679 
Protein GI219850246 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00148167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT GGATTATCTA CGGTGCAAAT GGTTACACCG GAACACTTAT CGCTCGTGCT 
GCGGTAGCTG CCGGACTCCG GCCACGCTTA GCCGGGCGCA ACGCAGAGGC GATTGCAGCA
TTGGCACAAG AACTGAACGT ACCGTTTACG ATTTGCCGCC TCGATGATCG AAATGGACTG
CGCAACACAC TACGTGGGGC GCAATTAGTG TTGCACTGCG CCGGCCCGTT CCAAGAGACA
AGTTCACCAA TGATCGATAC GTGTTTATCC ACCGGTGTGC ATTATCTCGA CATCACCGGC
GAGATTAGTG TCTTTGAGAC GGCAGCGGCC TATGACGGAT CGGCCAAACA GGCCGGTATC
ATGCTGATGC CCGGTGTAGG CTTCGATATT GTACCGTCAG ACTGTCTAGC CGCCCATCTC
GCCCGTCGCT TGCCGACAGC AACGACATTG ATACTGGCGT TTCGTGCGCT CGGCAGCATC
TCACGCGGAA CTGCGATTAC TATGTTAACT ATGGCAGCCA CCGGCTGTGA ACGACGTAAC
GGCAGATTAA TCCGAACACC ACCACTATCG GAAGTTCGCA CGTTCGATTT TGGACGCGGA
CCACAACCCT GTGTCAGTAT TCCATGGGGT GATGTTGCGA CAGCGTACTA CACAACCGGT
ATTCCCAACA TTAAAGTGTT TGTTGCAATT CCACGACGAG CACGGTACTG GCTTGGATTA
GGACGACGGC TATTACCGAT GATAAAGTTA CCGGTGATAC GTCAGGGATT GCGTTGGTTG
CTGGCCCGTA CTCTCTACGG TCCTGACCTA ACGAGCCGTA CCCACGGGCG AAGTATTATT
ATTGGTGAAG CCTCCGAGCT TAGTGGACGG CGTGTGATAA GCCGATTAGA CGGTCCAGAA
GGATACACAC TCACGGTACA GACTGCGCTG TTGATTGTAC AGAAAGTATT GAATGGAAAT
GTTACACCAG GATTCCACAC TCCCGCCGGT TTGTATGGGT CTAACTTGAT CACCGAGATA
CCAGATGTGG TTATACGTGA CATAGGTGAA TAG
 
Protein sequence
MNDWIIYGAN GYTGTLIARA AVAAGLRPRL AGRNAEAIAA LAQELNVPFT ICRLDDRNGL 
RNTLRGAQLV LHCAGPFQET SSPMIDTCLS TGVHYLDITG EISVFETAAA YDGSAKQAGI
MLMPGVGFDI VPSDCLAAHL ARRLPTATTL ILAFRALGSI SRGTAITMLT MAATGCERRN
GRLIRTPPLS EVRTFDFGRG PQPCVSIPWG DVATAYYTTG IPNIKVFVAI PRRARYWLGL
GRRLLPMIKL PVIRQGLRWL LARTLYGPDL TSRTHGRSII IGEASELSGR RVISRLDGPE
GYTLTVQTAL LIVQKVLNGN VTPGFHTPAG LYGSNLITEI PDVVIRDIGE