Gene Cagg_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3387 
Symbol 
ID7267127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4106277 
End bp4106936 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content56% 
IMG OID643568196 
Producthypothetical protein 
Protein accessionYP_002464667 
Protein GI219850234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA TCTTTCCCCG CAACGCCAAT CTTCTTGCCC GTCTCAGCAT CTTCGCGCTC 
GTCTTGCTCG TCGTCGAAGG TATCTTGATT CTCGGCGTCT ATTTCCGTTC CAACTACTTC
CGGCAGGTCA ATGTGGCCAT TGAGCAGCCG GTGGCGTTCA GCCACCAACT GCATGTCAAC
GTGGTCGGTA TAGATTGTCG CTACTGTCAC GTCTCGGTCG ACCAATCCTA CTTTGCCAAC
ATTCCGGCCA CCGAAACCTG CATGACCTGC CACTCACAAA TCAAGACCTA CAGTCCCCTG
TTGGAGAAGG TGCGCGAGAG CTACGCTACC GGTAAACCGA TTGAGTGGGT CAAGGTGTAC
GATCTCCCCA ACTTCGTTTA CTTCAACCAC TCGATCCACG TCAACAAAGG CATTGGCTGT
TCGACGTGCC ACGGCCAGGT GAACAATATG CCGGTGGTAT GGCAGCAGCA GGCGCTCTAT
ATGGGCTGGT GCTTGAACTG CCATCGTAAC CCAGAACTCT ACGTTCGGCC ACGGGAGGAG
GTCTACAACA TGGACTACGT CCCGCCGGCG AATCAGGTGG AGATTGGGCG CCGGTTGGTG
GCCGAGTATG GAATTATGCC GCCGGAGCAG TTGACCAACT GCTACGTGTG CCATCGCTAG
 
Protein sequence
MAQIFPRNAN LLARLSIFAL VLLVVEGILI LGVYFRSNYF RQVNVAIEQP VAFSHQLHVN 
VVGIDCRYCH VSVDQSYFAN IPATETCMTC HSQIKTYSPL LEKVRESYAT GKPIEWVKVY
DLPNFVYFNH SIHVNKGIGC STCHGQVNNM PVVWQQQALY MGWCLNCHRN PELYVRPREE
VYNMDYVPPA NQVEIGRRLV AEYGIMPPEQ LTNCYVCHR