| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3378 |
|---|
| Symbol | |
|---|
| ID | 7267118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4096356 |
|---|
| End bp | 4096973 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643568187 |
|---|
| Product | phosphoribosylglycinamide formyltransferase |
|---|
| Protein accession | YP_002464658 |
|---|
| Protein GI | 219850225 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
|---|
| TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.092004 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCAAGCA TTGCGGTGTT GTTGAGCGGC AGCGGCAGCA ACTTGCAGGC GCTGCTCGAT
GCGCAGGCTG CCGGTGAGCT GGCGGGCGAA GTGACGTTGG TGGTCAGTGA CCGCGCCCAA
GCATACGGCT TGCAACGGGC GCTCAACGCC GGGATTGCCG CCGCGCACGT GCCGCTCAGC
GCGCCGCGCG GCCCGCTGCG CCAGCAATGG GAACGGCGCT TGGCCGGCGT GGTCGCTTGC
TTCGAGCCAG ATCTGATCGT GCTGGCCGGT TTTATGCGCG TACTTTCGCC GGTATTTCTC
GAACGGTTTC CCGACAAGGT CATCAATCAA CATCCGGCCC TATTGCCCAC CGACGGCGGT
GATACGGTCA CAACCAGCAG TGGAATCGTG ATTCCGGCCC TACGTGGTGC CCACGTCGTC
GCCGACGCTA TCCGTCTTAA GTTGCCGGTA ACCGGTTGCA CGATCCATCG GGTGACACCA
CGGGTAGACG ATGGCCCCGT CTTGGCAAGG GCTGAAGTGC CGGTTCTCCC CGATGACACT
GTTGAGTCGC TCCACGAGCG GATCAAAACA GTGGAACGAC GGTTGATTGT AGAGACGGTA
AATCGATTAC TGGGATAA
|
|---|
| Protein sequence | MPSIAVLLSG SGSNLQALLD AQAAGELAGE VTLVVSDRAQ AYGLQRALNA GIAAAHVPLS
APRGPLRQQW ERRLAGVVAC FEPDLIVLAG FMRVLSPVFL ERFPDKVINQ HPALLPTDGG
DTVTTSSGIV IPALRGAHVV ADAIRLKLPV TGCTIHRVTP RVDDGPVLAR AEVPVLPDDT
VESLHERIKT VERRLIVETV NRLLG
|
|---|
| |