Gene Cagg_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3364 
Symbol 
ID7267104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4077451 
End bp4078590 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content56% 
IMG OID643568173 
ProductMonogalactosyldiacylglycerol synthase 
Protein accessionYP_002464644 
Protein GI219850211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.804764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000516086 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCGTC AACCAATTGA TGTGTTATTT GCTATTTCAG ATACCGGCGG CGGCCATCGT 
AGTGCTGCGG TGGCGATTAG TGCCGCGCTC GAACAGTTGT CGGGTGGTGA GATTACATGG
GCCATCGAAG ATCTCTTGCA GGCGACCAAT GTGCCCGGTA TTCGGAGCGC ACCCGGTATC
TACGACCAGC TTTCCACCCG TTGGCTGAAG TTGTACAATG TTTCGTTTCA GTTGACCAAC
TCGCGTTCGA CGGTAGGGTT TTTATCGCGG ATCGTGTATC TGATTGCCCG CCAAAATCTC
GAACGCCTGC TCGCCGAACG TCACCCACGC TTGGTGGTCG TCACCCATCC CCTTGTCCAT
CGTCTTGTCT GTGCCGCTCG CCGTCGCCAC AATGCGTTTC GCGTAGTAAC TGTCGTGACC
GATCTGGTCA CGCTCCACGC CGCCTGGAGT TATCCCGGTG TGGATTTGGC GCTGACCCCC
ACCGATGAAG CGTATCACCT GATGCGCAAA CGTGGCATGA AACCGAGTCA GTTGCAGCGC
TGCGGCTTCC CGGTCCATCC GAAGTTTGCC GCCGAAAATC GTGATGCTCC CACTGCTCGC
CGCGATTTGG GGTTCGATCC CGATCGCTTT ACCGTCTTGC TAACCGCCGG TGGTGTCGGC
GCCGGTCGTC TTGGTGAATT GGTTCATTCC CTTGAACAAC AGCTCCCTGA TAAGCAGCTC
CTCGTTGTGA CCGGTAAAAA TCGCGCGCTC TACGAGGATT TGCGGCGTGG GCCACGTTTG
CCGCATACCC ATGTGTTCGG TTTCGTTCAT AACATGGAAG AATTGATGGC CGCAAGTGAT
GTAGTGGTGA CGAAGGCCGG CCCAGGTACG CTGATGGAGG CGTTGGTGAT GCGTAAGCCG
GTGATTGTCA CCGAAGCGGT TGGGATTCAA GAACACGGTA ATATTGATTT TGTGCTGAAC
TACGAGCTAG GGTTCTTCTG TCCGACGACC GAGCGGATCG TCGCCGCTAT TACCAGTCTC
GAAGACCCGG CTCGCTATGC TGCGACGGTC GAACGTCTCA AACATGCCGT CCCCCGTGAC
GGAGCAATGC AGATTGCACG GGTTATTCAT CAGCAGTTAA GCTTGCGACC GGTACGGTAA
 
Protein sequence
MNRQPIDVLF AISDTGGGHR SAAVAISAAL EQLSGGEITW AIEDLLQATN VPGIRSAPGI 
YDQLSTRWLK LYNVSFQLTN SRSTVGFLSR IVYLIARQNL ERLLAERHPR LVVVTHPLVH
RLVCAARRRH NAFRVVTVVT DLVTLHAAWS YPGVDLALTP TDEAYHLMRK RGMKPSQLQR
CGFPVHPKFA AENRDAPTAR RDLGFDPDRF TVLLTAGGVG AGRLGELVHS LEQQLPDKQL
LVVTGKNRAL YEDLRRGPRL PHTHVFGFVH NMEELMAASD VVVTKAGPGT LMEALVMRKP
VIVTEAVGIQ EHGNIDFVLN YELGFFCPTT ERIVAAITSL EDPARYAATV ERLKHAVPRD
GAMQIARVIH QQLSLRPVR