Gene Cagg_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3324 
Symbol 
ID7267064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4034126 
End bp4036603 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content59% 
IMG OID643568137 
ProductAlpha-glucosidase 
Protein accessionYP_002464608 
Protein GI219850175 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000336077 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACGCACG CGCCGGCACG GGTCGGCTTG ACCGATACCC GTTATTTTCT GCCGTTGTCA 
CGCCTTGAGC GGGTGCAACC GATTGAACGC GGGATCCTGG CCGCGCTCGA TCATGAGTGG
CTGCGGGTGG AGTTTATCCG CGATGATATT GTTCGTTTGA AGATCAGTCG TGGTGGGGTG
TTCGATGAGC ATCCGACGTA TGCCGTCGCT GTTGATGTGA TGGCGACGCC GATCCCTGTG
TTTCACATCG TTGAGACGGA GGCGACCGTT GTCGTGCGTG GGGTGCAGCT TGAGGTGGTG
ATTGGGCGCG ATCCGTTTTC GGTGCGCGTG TGTCGCGCCG ACGGGAGTGT GGTGGCTGAG
ACGGCCCGTG GCCCTGATGG TGTACCTTGG GCTTACGCGA CCCTCAATGA TTCGTTTGCG
TTTCACCGGG TGTGTGCCCG TGAAGATGCT TTTCTCGGTT TGGGTGAGAA GACCGGTCGC
CTGAACCGTA AGGGGCGCGA TTTTATTTTG TGGAACAACG ATGTTCTCAG TCCGCAAGGT
GAAGCGGAAT TCGCCGTTGG GCGTGATCCG TCTGATCCGC GTGCCAAGAA TACCAGTACC
GAATTTGATC CCTACTACGT CTCGATCCCG TTTTTTTACC ATCTTGATCG GCACGGCAAC
GCCGCGGGGT TTTTTCTCGA TAATAGCTAT CGGGTGCATG TTGATTTTAC CCCGCCTGAA
ACGTATGGTA TCTGCGCGCT CGGTGGTCAG TATACCGAAT ACATCTTTGC CGGGCCGCAG
ATGGCTGCAA TCCTGGAGGG ATTTACCTGG CTAACCGGTC GACTTGCGCC ACCGCCGATC
TGGGCGTTGG GCTATCATCA GTGCCGTTGG CATCGCTACA GCCAATCTGA AGTGCTGGCA
CTCGCTGCTC GGCACCGCGA ACGCAATATT CCCTGCGATA CGCTCTGGCT CGATATCGAG
CACATGGATG GGTATCGGGT CTTTACGTGG AACCGTGAGC TGTTTCCCGA TCCGCGCACC
CTTGCCCAAC AATTGCATGA CCAAGGCTTT CGCCTGATCA CGATTGTCGA TCCGGGGGTG
AAGGTTGACC CGCAGTTTGC GCTGTACGAA ACGGGTCGGG CCAACGATTT CTTCTGTCGC
ACGAGTAGTG GTGACATCTA CATCGGGCAG GTCTGGCCGG GTCGTACTGC GTTTCCTGAT
TTTGTGAAGC CCGATGTGCG AACGTGGTGG GGGCAGCTCA ACGCCGACCA TGCGCGGTTG
GGCATCGCCG GTATTTGGAA TGACATGAAT GAACCGGCCA CCGGTGATAT TCCGCCTTAC
GCGATGCGCT TTAACGGTGG GCGTGAGCCG CACGAGCGTT ATCACAATCA GTATGCTCTT
CTCATGGCAA TGGCGACCGT CGAAGGGTTG CGCGCCGCCT TTCCCGACCG GCGCACGTTT
GTGTTGTCGC GGGCCGGTTT TGCCGGTATT CAACGGTACG CCGCCAACTG GATGGGTGAT
AACTGTGCGC GCTGGGATCA CCTCTGGTTG AGTATGCCCA TGGCGATGGG ATTGGGCCTC
TCCGGTCAGG CGTTTGTCGG CGCCGATGTC GGCGGGTTTG CCGGTGATGC CTCTCCCGAA
TTGTTCGCAC GGTGGATGCA GTGTGCGGCG CTGACGGCGT TTTGTCGGAA TCATAGCGCC
TATGGTCATA TTGACCAGTA CGTCTGGTCG TTTGGTCCGG CTATTGAGCG TATCGCCCGC
GCTGCGATCG CGTTGCGTTA CCGGCTGATG CCGTATCTCG TCACGGCCTT TATGCACACG
GTCGAAACCG GTGAACCGGT GCAGCAGCCG CCGGTGTTTG CCTATCAGTC CGACCCGCTC
ACCCACACAA TTGACGACCA ATTCTTGTTG GGTCGTGATC TGCTGGTAGC GCCGGTATAT
GTCGCCGGTG CTACCTCCCG CCAGCTCTAC CTCCCGGCGG GCGAGTGGTA CGACTGGTAT
AGCGATGCGT GCTACACCGG CGAGCAGTTT ATCGTTGTGG CAGCACCGCT CGACCGTATC
CCGCTGTTGG TGCGCGCCGG TGCGGTGATC CCGCTCTGGC CGGACGTGCC CCCTTCCACA
ATGGGCTACT ACCCCACGCG GCTTGAGTTG CACCTGTTTG TACCGCTATT CGATGGTACC
TACACCTCCG ACTTGCACGA AGATGATGGC TTGACCATGG CGTTCCAGCA CGGCGCCTAC
TACCGTACCA CCTTCACTGT CGAACGACGC GGTCAACAGA TTACGTTGAC GGCGACGGTG
CGCGGCGATG GGTTTGCCGA GTTTGCGCGC GAAGCGGTGA CACTCGTGAT CCACGGTGCG
CAGCCGGTTT CCATCACCGT TAACGGTGAA CGTCACGCTG TGCTCGGTGA ACAGGTGACG
TTTGCCGATC ACGGGCAGGG GTTTGTGGTG GTACTTGAGG AAGCTGCTCC CGGTGACGTA
TCGGCTCAAT CCGAATGA
 
Protein sequence
MTHAPARVGL TDTRYFLPLS RLERVQPIER GILAALDHEW LRVEFIRDDI VRLKISRGGV 
FDEHPTYAVA VDVMATPIPV FHIVETEATV VVRGVQLEVV IGRDPFSVRV CRADGSVVAE
TARGPDGVPW AYATLNDSFA FHRVCAREDA FLGLGEKTGR LNRKGRDFIL WNNDVLSPQG
EAEFAVGRDP SDPRAKNTST EFDPYYVSIP FFYHLDRHGN AAGFFLDNSY RVHVDFTPPE
TYGICALGGQ YTEYIFAGPQ MAAILEGFTW LTGRLAPPPI WALGYHQCRW HRYSQSEVLA
LAARHRERNI PCDTLWLDIE HMDGYRVFTW NRELFPDPRT LAQQLHDQGF RLITIVDPGV
KVDPQFALYE TGRANDFFCR TSSGDIYIGQ VWPGRTAFPD FVKPDVRTWW GQLNADHARL
GIAGIWNDMN EPATGDIPPY AMRFNGGREP HERYHNQYAL LMAMATVEGL RAAFPDRRTF
VLSRAGFAGI QRYAANWMGD NCARWDHLWL SMPMAMGLGL SGQAFVGADV GGFAGDASPE
LFARWMQCAA LTAFCRNHSA YGHIDQYVWS FGPAIERIAR AAIALRYRLM PYLVTAFMHT
VETGEPVQQP PVFAYQSDPL THTIDDQFLL GRDLLVAPVY VAGATSRQLY LPAGEWYDWY
SDACYTGEQF IVVAAPLDRI PLLVRAGAVI PLWPDVPPST MGYYPTRLEL HLFVPLFDGT
YTSDLHEDDG LTMAFQHGAY YRTTFTVERR GQQITLTATV RGDGFAEFAR EAVTLVIHGA
QPVSITVNGE RHAVLGEQVT FADHGQGFVV VLEEAAPGDV SAQSE