Gene Cagg_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3317 
Symbol 
ID7267793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4018218 
End bp4019651 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content59% 
IMG OID643568130 
Productcarbohydrate kinase FGGY 
Protein accessionYP_002464601 
Protein GI219850168 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID[TIGR02627] rhamnulokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000296765 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGAAC GAGCGCATTG GATTGCCATT GATATTGGTG CGTCTAGTGG TCGCGTGATC 
TTAGGCCGAT GGGATGGTAG TCGGGTTGTA TTAGAGGAAC TGCACCGCTT CCCAAACGGT
ATGATCGAGC GTGAGGGTCA TCTGTTTTGG GAGGTGGGAC GGCTATGGGT AGAGGTACAA
CGTGGCTTAC AGCAGTATGC TGCGAACGAA GAGGTGACAC TCCTGCGGAG CATCGGTATC
GATACGTGGG CGGTTGATTA TGGCCTGCTC GATGCCCAGG GTGAGCTGAT CGGCGATCCG
TTTGCGTATC GCGATCCGCG CAACAATGGT ATTGCCGAGC AGGTTGATGC GCTTATCTCA
CCGACCGAGT TGTACCAACG CACCGGTTTG CAGCGATTAC CGTTTAATAC ACTTTACCAA
TTGTACGCTG AACGGCATAG TGGCCGGTTG GAGCGAGCGA CGGCCCTTCT CCTCATTCCT
GACCTGTTCC ATTATTGGTT GACCGGACAA CGAGTGGCGG AATATACCAA CGCCAGCACC
ACCATGTTTC TCGATGCACG GCAGCGGGTT TGGGCAACCG ATCTGCTCAC CCCGCTGGGC
ATTCCAACGC ACATCTTGCC GCCGTTGGTG ATGCCGGGCA CGCGCCTTGG CCCGTTGCGG
CCTGAACTCC AAGCCGATCT GGGGTTGCCG GCGAGCGTGA CGGTAGTGGC AGTAGGCACT
CACGACACGG CCAGTGCAGT TGCCGCCGTA CCGCATCTTG ATGCGCAGAG CGCTTACATC
AGCAGCGGCA CGTGGAGTTT GGTTGGCGTC GAGCGGACTG AACCGCTGAT CAATGATGCG
GCTCGTCAAT TGAATGTGAC GAACGAAGGC GGCGTGTACG GCACAATCCG TTTGCTCAAG
AACGTAAGCG GGTTGTGGCT GTTGCAAGAG TGCCAACGGC GCTGGCACGA AGATGGTCTC
AACCTACGTT GGGACGATAT TGTCGCGCAA GCTGCCACCG CGCCGCCGCG TCGGTCGCTG
ATCGATCCCG ATGCGCCGGA GTTTCTCGCC GTCGGTGATA TGCCGGCGCG CATTCGCGAC
TACTGCCGGC GTACCGGCCA GCCGGAGCCG GAAACGGTAG GTGAAATTGC CCGCTGCTGC
CTTGATAGTC TTGCCCTACG CTACCAACAG GTGATTGACG CGCTGGCCGA ACTCACCGGG
CAGACCATCA CCACGGTGCG GATCGTTGGC GGTGGCAGTC AGAACGCCCT GCTTTGCCAA
TTAACTGCCG ACGCCTGCCG GCGGCCGGTC GTAGCCGGTC CGACCGAAGG TACGGCGCTG
GGGAACATCC TTGTGCAAGC AATTGCGACG GGCTATCTAC CCAATCTGTC AACTGCACGA
CAAGTAGCCG CTGCTTCGGT TGGGCAGCAA CGTTACGAAC CGCGCGTTGG GTGA
 
Protein sequence
MAERAHWIAI DIGASSGRVI LGRWDGSRVV LEELHRFPNG MIEREGHLFW EVGRLWVEVQ 
RGLQQYAANE EVTLLRSIGI DTWAVDYGLL DAQGELIGDP FAYRDPRNNG IAEQVDALIS
PTELYQRTGL QRLPFNTLYQ LYAERHSGRL ERATALLLIP DLFHYWLTGQ RVAEYTNAST
TMFLDARQRV WATDLLTPLG IPTHILPPLV MPGTRLGPLR PELQADLGLP ASVTVVAVGT
HDTASAVAAV PHLDAQSAYI SSGTWSLVGV ERTEPLINDA ARQLNVTNEG GVYGTIRLLK
NVSGLWLLQE CQRRWHEDGL NLRWDDIVAQ AATAPPRRSL IDPDAPEFLA VGDMPARIRD
YCRRTGQPEP ETVGEIARCC LDSLALRYQQ VIDALAELTG QTITTVRIVG GGSQNALLCQ
LTADACRRPV VAGPTEGTAL GNILVQAIAT GYLPNLSTAR QVAAASVGQQ RYEPRVG