| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3316 |
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| Symbol | |
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| ID | 7267792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 4016014 |
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| End bp | 4018206 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568129 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002464600 |
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| Protein GI | 219850167 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000193646 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACCG ATATTACTCG CTTTCGACAT GTCTCCTATG GCTGGGATAC CGCGTATGCT
GCGACGCTCG ATCCGGTGGC CCGGCTGGTC TACCGCTCGA ACTTGTTAGG GAGTGATCAG
CGGATTACCA ATACCGGTGG CGGCAATACA TCGGCCAAAA TCCTCGAACG CGATCCACTG
ACCGGTGCGC CGGTCGAGGT GTTGTGGGTG AAGGGGTCGG GCGGCGATCT GCGCACCAGC
ACCCGCGCCA ATTTCGCCTC GCTCGAGTTG AACAAGCTGC GTGAATTGCG CGCGATCTAT
CTGCGCGATC CTAACCGTGG CCCGAAAACC GCCATCGAAG ACGCGATGGT TGATCTCTAC
CCCCATTGCA CCTTCAATCT CAACCCGCGT GCCTCATCAA TTGATACGCC ACTGCATGCC
TTTATTCCCT ATCGTCATGT CGATCACATG CACCCCAATG CGGTGATCGC AATCGCTGCC
TCGCGCAACG GCGAGCGGCT GACCCGCGAA ATCTACGGCG ATGAGGTGAT TTGGACGCCG
TGGCAGCGGC CCGGTTTTGA TTTAGGCATG AAACTGGAAC GGATTTGCCG CGAGCATCCG
CAGGCGAAGG GGGTAATTTT GGGCGGGCAC GGTTTGATCA ATTGGGCGGA TGATGATCAA
GAGTGTTACG AGCGCACACT GACGTTGATC GAACGAGCCG CGCGCTATAT CGAAGAGCGT
GATCGTGGTG ACGCGACCTT CGGCGGACCG AAGTATACCG CCTTACCGCT TGAAGCGCGA
CGAGCTACGC TCGCTGCAAT CTTACCGTGG CTGCGTGGCC AAATCAGCCG CCAGCGCCGG
TTTATCGCCA CCATTCAAGA CGATGAGCGT ACTCTCCGCT TTGTGAACAG CGTCGATGCG
CCGCGTTTGG CCGAGCTAGG CACCAGTTGC CCCGACCACT TCCTGCGCAC CAAGATCAAA
CCGCTCTATA TTGACTGGAA CCCGCAAGCC GAGAGTCTGG CCGATCTGCG CCGCAAGCTG
GCTGATGGCC TTGAAGGCTA TCGAGCCGAT TACACCCGCT ACTACGAAAC CCACCGCCGG
CCCGACTCGC CGCCGATGCG CGATCCAAAT CCGACCGTGA TTCTGATTCC CGGTTTAGGC
ATGATTGCGT GGGGCAAAGA CAAGAGCGAG TCGCGGGTGA CCGCCGAGTT CTATACTGCG
GCGATCGAGG TGATGCGCGG GGCCGAGGCG ATTGATGAGT ATGTGGCGCT GCCGTTGCAA
GAGGCGTTTG ATATCGAGTA TTGGCAGCTC GAAGAGGCGA AGTTGCGCCG GATGCCGCCG
GAAAAAGAGC TAGCCCGGCA GGTGATCGCA GTGGTGGGAG GCGGCAGTGG GATCGGGCGC
GAGGTGGCGC TGCGTTTAGC CAACGAGGGG GCGCACATCG TGTGCGTTGA CAAAGACGGC
GCCGCAGCGC AGGCGACAGC GCAGGCTATC ATTGACCGGC ACGGTATGGG GATCGGCGTC
GCTGGCAGCG ATATTTCGGC CTGCGGCCCA GCCATTGGCT TGGTGGCCGA TATTACCGAC
CGCGCGAGTG TGCGCGCGAT GCTCCAGCAA GCGACGTTAG CCTATGGCGG CCTCGATGCG
GTGGCCGTCA CTGCTGGCAT CTTCGTTTCC CCTGATGCCG AAGGCCGCAT CCGCGACGAG
CAGTGGGCTT TGACCTTTGC GATCAATGTT ACCGGTCACT ATCTGGTCGC CGATGAAGCG
GCCAAAATCT GGCGCGAGCA GGGTTTGCCG GCCAGTCTTG TTTTGACCAC CTCGGTCAAT
GCGGTGGTCG CCAAGAAGGG GTCGTTGGCC TATGATACCA GTAAAGCGGC GGCCAATCAT
CTCATCCGCG AACTTGCCAT TGAACTCGCA CCGTTAGTAC GGGTCAACGG CGTCGCACCG
GCGACGGTTG TGCAGGGCAG TGGTATGTTC CCTCGCGAGC GGGTGATTTC CTCACTCATC
AAATACGGCA TTCCTTTTTC CACCGACGAA CCAACCGAGG CGCTGACCGA GAAACTGGCC
CGCTTCTACG CCGAGCGGTC GTTGCTCAAG CGACCCATTA CCCCCGTCGA TCAGGCGGAA
GCCTTCTTTC TCTTCCTCAG CCAACGGCTC AGCCAGACGA CGGGACAGAT TATTACGGTT
GATGGCGGCT TACACGAAGC CTTTTTACGT TAA
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| Protein sequence | MNTDITRFRH VSYGWDTAYA ATLDPVARLV YRSNLLGSDQ RITNTGGGNT SAKILERDPL
TGAPVEVLWV KGSGGDLRTS TRANFASLEL NKLRELRAIY LRDPNRGPKT AIEDAMVDLY
PHCTFNLNPR ASSIDTPLHA FIPYRHVDHM HPNAVIAIAA SRNGERLTRE IYGDEVIWTP
WQRPGFDLGM KLERICREHP QAKGVILGGH GLINWADDDQ ECYERTLTLI ERAARYIEER
DRGDATFGGP KYTALPLEAR RATLAAILPW LRGQISRQRR FIATIQDDER TLRFVNSVDA
PRLAELGTSC PDHFLRTKIK PLYIDWNPQA ESLADLRRKL ADGLEGYRAD YTRYYETHRR
PDSPPMRDPN PTVILIPGLG MIAWGKDKSE SRVTAEFYTA AIEVMRGAEA IDEYVALPLQ
EAFDIEYWQL EEAKLRRMPP EKELARQVIA VVGGGSGIGR EVALRLANEG AHIVCVDKDG
AAAQATAQAI IDRHGMGIGV AGSDISACGP AIGLVADITD RASVRAMLQQ ATLAYGGLDA
VAVTAGIFVS PDAEGRIRDE QWALTFAINV TGHYLVADEA AKIWREQGLP ASLVLTTSVN
AVVAKKGSLA YDTSKAAANH LIRELAIELA PLVRVNGVAP ATVVQGSGMF PRERVISSLI
KYGIPFSTDE PTEALTEKLA RFYAERSLLK RPITPVDQAE AFFLFLSQRL SQTTGQIITV
DGGLHEAFLR
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