Gene Cagg_3312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3312 
Symbol 
ID7267788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4011068 
End bp4012081 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content56% 
IMG OID643568125 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002464596 
Protein GI219850163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00158011 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCTA AGTTGCGTCG CCTGCTGAGC TGGGAAGGGT TGCTGCTGGC GATTTTGGTG 
TTGGTAGCAG CAGTGAATGC TAACCTCGCT CCGGTATATA TGAGCTTGAA TAACCAGATC
AACCTCTTTC AGTTGTCGAT CGAAAAGATT ATTGTCGCGC TGGTGATGAC GTTCATCATC
ATCAACGGAG AGATCGATCT GTCGGTGGCC TCGGTCATGG GACTGGCCGC ATGCGTGGTT
GCGGTTCTGT TCGATCGTGG CGTACCGATG GAGATAGCGA TTGTGGTGGC ACTCTTGGTC
GGTTTGCTTT GTGGTGCGTT CAATGGCTTT TGGGTCGCTT ATGTTGGCTT GCCGTCATTG
GCGGTTACGC TGGCCGGGAT GATCGGTTTT CGTGGTGTGG CCCGTATTCT CATTGAAGAT
CGTTCGATTG GTGACTTCCC GGCGTGGTTT ACCGCACTTG GTCAGCAGCC GTTGATTGGC
CCGTTTCCCT TTAGCCTGAT CCTCTTTGCG CTGCTGTTTA CGCTGGCGTT GATCGTGCTG
CAATACTCTG GCGTAGGCCG CTTGCTCTAC GTAGTCGGCC ACAATGCCGC CGTAGCTCGC
TATTCCGGCA TCGATGTTCC CCGCCTCAAA CTTGGCCTAT TTATCGCTTC CGGCTTTGTC
GCTGCCCTTG CCGGCGTCTT GCTTGCCGCC CGTCTTGGTG CGGTGCGCGG CAATACCGCC
GATGGCTTCG AGATCGACAT CATCACAATG GTGTTGCTCG GCGGGGTGAG CATCTTTGGC
GGCACCGGCA ATCTGGCCGG CGTTGGTCTG TCTATTCTCG TCATCCTCAA CTTGCGCAAC
GGAATGTCGT TGCTCAATGT GACCGGCAAC GTGCAGACCG GCGTGGTTGG GATGTTGTTG
ATCCTGTCGG TGTTGTTGCC CAATCTAGCG CAGATGGCGC GTGAACGCTG GCAGCAGCGC
GCCGTGCAAC GAAAGGAGGT ACAGGCTGGG GTCGAGACCA GTGTTTCATC GTAG
 
Protein sequence
MKAKLRRLLS WEGLLLAILV LVAAVNANLA PVYMSLNNQI NLFQLSIEKI IVALVMTFII 
INGEIDLSVA SVMGLAACVV AVLFDRGVPM EIAIVVALLV GLLCGAFNGF WVAYVGLPSL
AVTLAGMIGF RGVARILIED RSIGDFPAWF TALGQQPLIG PFPFSLILFA LLFTLALIVL
QYSGVGRLLY VVGHNAAVAR YSGIDVPRLK LGLFIASGFV AALAGVLLAA RLGAVRGNTA
DGFEIDIITM VLLGGVSIFG GTGNLAGVGL SILVILNLRN GMSLLNVTGN VQTGVVGMLL
ILSVLLPNLA QMARERWQQR AVQRKEVQAG VETSVSS